Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim4P70271 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Pdlim4P70271 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim4P70271 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim4P70271 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pdlim4P70271 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdlim4P70271 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Pdlim4P70271 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdlim4P70271 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pdlim4P70271 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Pdlim4P70271 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
Pdlim4P70271 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pdlim4P70271 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Pdlim4P70271 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Pdlim4P70271 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pdlim4P70271 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Pdlim4P70271 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.63■□□□□ 0.41
Pdlim4P70271 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdlim4P70271 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdlim4P70271 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Pdlim4P70271 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdlim4P70271 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pdlim4P70271 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Pdlim4P70271 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pdlim4P70271 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pdlim4P70271 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.62■□□□□ 0.41
Pdlim4P70271 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdlim4P70271 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdlim4P70271 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim4P70271 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pdlim4P70271 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim4P70271 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Pdlim4P70271 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim4P70271 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim4P70271 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim4P70271 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Pdlim4P70271 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim4P70271 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim4P70271 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Pdlim4P70271 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Pdlim4P70271 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim4P70271 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim4P70271 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim4P70271 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim4P70271 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim4P70271 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim4P70271 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim4P70271 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim4P70271 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.59■□□□□ 0.41
Pdlim4P70271 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.59■□□□□ 0.41
Pdlim4P70271 Gm45444-201ENSMUST00000211394 898 ntBASIC17.59■□□□□ 0.41
Pdlim4P70271 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim4P70271 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Pdlim4P70271 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim4P70271 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim4P70271 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Pdlim4P70271 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pdlim4P70271 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pdlim4P70271 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.58■□□□□ 0.4
Pdlim4P70271 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pdlim4P70271 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pdlim4P70271 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pdlim4P70271 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pdlim4P70271 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pdlim4P70271 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Pdlim4P70271 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pdlim4P70271 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pdlim4P70271 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Pdlim4P70271 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pdlim4P70271 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pdlim4P70271 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pdlim4P70271 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pdlim4P70271 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Pdlim4P70271 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim4P70271 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim4P70271 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim4P70271 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.56■□□□□ 0.4
Pdlim4P70271 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Pdlim4P70271 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Pdlim4P70271 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Pdlim4P70271 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim4P70271 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim4P70271 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Pdlim4P70271 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pdlim4P70271 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pdlim4P70271 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.55■□□□□ 0.4
Pdlim4P70271 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Pdlim4P70271 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim4P70271 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim4P70271 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim4P70271 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pdlim4P70271 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim4P70271 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim4P70271 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim4P70271 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim4P70271 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim4P70271 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim4P70271 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Pdlim4P70271 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim4P70271 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms