Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Rps28P62858 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rps28P62858 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Rps28P62858 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC12.79□□□□□ -0.36
Rps28P62858 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Rps28P62858 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rps28P62858 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rps28P62858 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rps28P62858 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rps28P62858 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rps28P62858 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rps28P62858 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rps28P62858 Grk6-206ENSMUST00000224995 2971 ntBASIC12.79□□□□□ -0.36
Rps28P62858 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rps28P62858 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rps28P62858 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Rps28P62858 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rps28P62858 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC12.78□□□□□ -0.36
Rps28P62858 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rps28P62858 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rps28P62858 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rps28P62858 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Rps28P62858 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rps28P62858 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC12.78□□□□□ -0.36
Rps28P62858 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Rps28P62858 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rps28P62858 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rps28P62858 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
Rps28P62858 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rps28P62858 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rps28P62858 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rps28P62858 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rps28P62858 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Rps28P62858 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rps28P62858 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rps28P62858 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rps28P62858 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rps28P62858 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC12.77□□□□□ -0.37
Rps28P62858 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rps28P62858 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rps28P62858 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Rps28P62858 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rps28P62858 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Rps28P62858 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rps28P62858 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rps28P62858 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rps28P62858 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rps28P62858 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rps28P62858 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Rps28P62858 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rps28P62858 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Rps28P62858 Haglr-201ENSMUST00000100000 2085 ntBASIC12.75□□□□□ -0.37
Rps28P62858 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rps28P62858 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rps28P62858 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rps28P62858 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC12.75□□□□□ -0.37
Rps28P62858 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rps28P62858 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rps28P62858 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rps28P62858 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Rps28P62858 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rps28P62858 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rps28P62858 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rps28P62858 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC12.74□□□□□ -0.37
Rps28P62858 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Rps28P62858 Gm5540-201ENSMUST00000131852 1848 ntBASIC12.74□□□□□ -0.37
Rps28P62858 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rps28P62858 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rps28P62858 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rps28P62858 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rps28P62858 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rps28P62858 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rps28P62858 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rps28P62858 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rps28P62858 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rps28P62858 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Rps28P62858 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rps28P62858 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rps28P62858 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rps28P62858 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rps28P62858 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rps28P62858 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rps28P62858 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rps28P62858 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC12.72□□□□□ -0.37
Rps28P62858 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rps28P62858 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Rps28P62858 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rps28P62858 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rps28P62858 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rps28P62858 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rps28P62858 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rps28P62858 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rps28P62858 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rps28P62858 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Rps28P62858 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rps28P62858 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rps28P62858 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Rps28P62858 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rps28P62858 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rps28P62858 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms