Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RoraP51448 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RoraP51448 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.12■□□□□ 0.81
RoraP51448 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.12■□□□□ 0.81
RoraP51448 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.12■□□□□ 0.81
RoraP51448 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
RoraP51448 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
RoraP51448 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
RoraP51448 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RoraP51448 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RoraP51448 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.11■□□□□ 0.81
RoraP51448 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RoraP51448 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.11■□□□□ 0.81
RoraP51448 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.11■□□□□ 0.81
RoraP51448 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.11■□□□□ 0.81
RoraP51448 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
RoraP51448 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.1■□□□□ 0.81
RoraP51448 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RoraP51448 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RoraP51448 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RoraP51448 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RoraP51448 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RoraP51448 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RoraP51448 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
RoraP51448 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RoraP51448 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RoraP51448 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.08■□□□□ 0.81
RoraP51448 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RoraP51448 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RoraP51448 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.08■□□□□ 0.8
RoraP51448 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RoraP51448 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
RoraP51448 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RoraP51448 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RoraP51448 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RoraP51448 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RoraP51448 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
RoraP51448 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RoraP51448 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
RoraP51448 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.07■□□□□ 0.8
RoraP51448 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.07■□□□□ 0.8
RoraP51448 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.07■□□□□ 0.8
RoraP51448 Gm7417-201ENSMUST00000192950 473 ntBASIC20.07■□□□□ 0.8
RoraP51448 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.07■□□□□ 0.8
RoraP51448 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.07■□□□□ 0.8
RoraP51448 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RoraP51448 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RoraP51448 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RoraP51448 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RoraP51448 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.07■□□□□ 0.8
RoraP51448 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RoraP51448 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RoraP51448 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RoraP51448 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RoraP51448 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.06■□□□□ 0.8
RoraP51448 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RoraP51448 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
RoraP51448 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RoraP51448 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.05■□□□□ 0.8
RoraP51448 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RoraP51448 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RoraP51448 Gm40881-201ENSMUST00000223397 166 ntBASIC20.05■□□□□ 0.8
RoraP51448 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RoraP51448 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RoraP51448 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
RoraP51448 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RoraP51448 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RoraP51448 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RoraP51448 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RoraP51448 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.04■□□□□ 0.8
RoraP51448 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.04■□□□□ 0.8
RoraP51448 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
RoraP51448 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RoraP51448 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RoraP51448 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RoraP51448 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RoraP51448 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RoraP51448 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.02■□□□□ 0.8
RoraP51448 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RoraP51448 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RoraP51448 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.02■□□□□ 0.8
RoraP51448 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
RoraP51448 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RoraP51448 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
RoraP51448 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
RoraP51448 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
RoraP51448 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RoraP51448 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RoraP51448 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RoraP51448 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RoraP51448 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RoraP51448 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RoraP51448 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RoraP51448 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RoraP51448 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RoraP51448 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.01■□□□□ 0.79
RoraP51448 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RoraP51448 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
RoraP51448 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RoraP51448 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms