Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.81■■□□□ 1.08
Lhx3P50481 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lhx3P50481 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lhx3P50481 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lhx3P50481 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lhx3P50481 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.8■■□□□ 1.08
Lhx3P50481 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lhx3P50481 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Lhx3P50481 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.79■■□□□ 1.08
Lhx3P50481 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Lhx3P50481 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lhx3P50481 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.79■■□□□ 1.08
Lhx3P50481 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lhx3P50481 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Lhx3P50481 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
Lhx3P50481 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
Lhx3P50481 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Lhx3P50481 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Lhx3P50481 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Lhx3P50481 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Lhx3P50481 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.77■■□□□ 1.08
Lhx3P50481 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Lhx3P50481 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lhx3P50481 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lhx3P50481 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Lhx3P50481 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Lhx3P50481 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lhx3P50481 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lhx3P50481 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.76■■□□□ 1.07
Lhx3P50481 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lhx3P50481 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Lhx3P50481 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Lhx3P50481 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lhx3P50481 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.75■■□□□ 1.07
Lhx3P50481 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lhx3P50481 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lhx3P50481 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Lhx3P50481 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Lhx3P50481 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lhx3P50481 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lhx3P50481 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Lhx3P50481 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Lhx3P50481 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.74■■□□□ 1.07
Lhx3P50481 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.74■■□□□ 1.07
Lhx3P50481 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.74■■□□□ 1.07
Lhx3P50481 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lhx3P50481 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Lhx3P50481 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lhx3P50481 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lhx3P50481 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lhx3P50481 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.73■■□□□ 1.07
Lhx3P50481 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lhx3P50481 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Lhx3P50481 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Lhx3P50481 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.72■■□□□ 1.07
Lhx3P50481 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.72■■□□□ 1.07
Lhx3P50481 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.72■■□□□ 1.07
Lhx3P50481 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lhx3P50481 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lhx3P50481 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lhx3P50481 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Lhx3P50481 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lhx3P50481 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lhx3P50481 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.72■■□□□ 1.07
Lhx3P50481 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.71■■□□□ 1.07
Lhx3P50481 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.71■■□□□ 1.07
Lhx3P50481 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.71■■□□□ 1.07
Lhx3P50481 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lhx3P50481 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lhx3P50481 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lhx3P50481 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.71■■□□□ 1.07
Lhx3P50481 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lhx3P50481 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.7■■□□□ 1.07
Lhx3P50481 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.7■■□□□ 1.06
Lhx3P50481 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lhx3P50481 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
Lhx3P50481 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lhx3P50481 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.69■■□□□ 1.06
Lhx3P50481 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lhx3P50481 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lhx3P50481 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lhx3P50481 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lhx3P50481 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Lhx3P50481 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lhx3P50481 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Lhx3P50481 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.68■■□□□ 1.06
Lhx3P50481 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.68■■□□□ 1.06
Lhx3P50481 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lhx3P50481 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lhx3P50481 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lhx3P50481 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Lhx3P50481 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.67■■□□□ 1.06
Lhx3P50481 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lhx3P50481 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lhx3P50481 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lhx3P50481 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lhx3P50481 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
Lhx3P50481 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lhx3P50481 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lhx3P50481 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.66■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms