Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Abca1P41233 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Abca1P41233 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Abca1P41233 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Abca1P41233 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Abca1P41233 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Abca1P41233 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.57■□□□□ 0.4
Abca1P41233 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Abca1P41233 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Abca1P41233 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Abca1P41233 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Abca1P41233 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Abca1P41233 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.56■□□□□ 0.4
Abca1P41233 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Abca1P41233 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Abca1P41233 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Abca1P41233 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Abca1P41233 Gm10399-202ENSMUST00000202768 748 ntBASIC17.56■□□□□ 0.4
Abca1P41233 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Abca1P41233 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Abca1P41233 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Abca1P41233 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.55■□□□□ 0.4
Abca1P41233 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
Abca1P41233 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.55■□□□□ 0.4
Abca1P41233 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Abca1P41233 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Abca1P41233 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Abca1P41233 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Abca1P41233 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Abca1P41233 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.55■□□□□ 0.4
Abca1P41233 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Abca1P41233 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Abca1P41233 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Abca1P41233 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Abca1P41233 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Abca1P41233 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Abca1P41233 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Abca1P41233 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Abca1P41233 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Abca1P41233 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Abca1P41233 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.54■□□□□ 0.4
Abca1P41233 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Abca1P41233 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.54■□□□□ 0.4
Abca1P41233 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Abca1P41233 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Abca1P41233 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Abca1P41233 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Abca1P41233 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Abca1P41233 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Abca1P41233 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Abca1P41233 Gm12821-201ENSMUST00000120022 600 ntBASIC17.53■□□□□ 0.4
Abca1P41233 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Abca1P41233 Gm40881-201ENSMUST00000223397 166 ntBASIC17.53■□□□□ 0.4
Abca1P41233 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Abca1P41233 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.53■□□□□ 0.4
Abca1P41233 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Abca1P41233 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Abca1P41233 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Abca1P41233 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Abca1P41233 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.52■□□□□ 0.4
Abca1P41233 Gm45417-201ENSMUST00000209533 758 ntBASIC17.52■□□□□ 0.4
Abca1P41233 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Abca1P41233 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Abca1P41233 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Abca1P41233 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.52■□□□□ 0.4
Abca1P41233 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.52■□□□□ 0.4
Abca1P41233 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.52■□□□□ 0.4
Abca1P41233 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Abca1P41233 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Abca1P41233 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Abca1P41233 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Abca1P41233 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Abca1P41233 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Abca1P41233 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Abca1P41233 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Abca1P41233 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Abca1P41233 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Abca1P41233 Golgb1-201ENSMUST00000023534 498 ntBASIC17.5■□□□□ 0.39
Abca1P41233 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Abca1P41233 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Abca1P41233 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Abca1P41233 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.49■□□□□ 0.39
Abca1P41233 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.49■□□□□ 0.39
Abca1P41233 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
Abca1P41233 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Abca1P41233 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Abca1P41233 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Abca1P41233 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Abca1P41233 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Abca1P41233 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Abca1P41233 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.49■□□□□ 0.39
Abca1P41233 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.48■□□□□ 0.39
Abca1P41233 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Abca1P41233 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Abca1P41233 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Abca1P41233 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Abca1P41233 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Abca1P41233 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Abca1P41233 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Abca1P41233 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms