Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Gm15546-201ENSMUST00000122095 826 ntBASIC20.15■□□□□ 0.82
Slc6a11P31650 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.15■□□□□ 0.82
Slc6a11P31650 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc6a11P31650 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Slc6a11P31650 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc6a11P31650 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc6a11P31650 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.15■□□□□ 0.82
Slc6a11P31650 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc6a11P31650 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Slc6a11P31650 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Slc6a11P31650 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc6a11P31650 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.14■□□□□ 0.81
Slc6a11P31650 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Slc6a11P31650 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.14■□□□□ 0.81
Slc6a11P31650 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Slc6a11P31650 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc6a11P31650 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc6a11P31650 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc6a11P31650 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Slc6a11P31650 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.13■□□□□ 0.81
Slc6a11P31650 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Slc6a11P31650 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Slc6a11P31650 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc6a11P31650 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc6a11P31650 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc6a11P31650 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
Slc6a11P31650 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.12■□□□□ 0.81
Slc6a11P31650 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc6a11P31650 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc6a11P31650 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Slc6a11P31650 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc6a11P31650 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc6a11P31650 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Slc6a11P31650 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc6a11P31650 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Slc6a11P31650 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.11■□□□□ 0.81
Slc6a11P31650 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc6a11P31650 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Slc6a11P31650 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc6a11P31650 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc6a11P31650 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc6a11P31650 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Slc6a11P31650 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc6a11P31650 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.09■□□□□ 0.81
Slc6a11P31650 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
Slc6a11P31650 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.09■□□□□ 0.81
Slc6a11P31650 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc6a11P31650 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Slc6a11P31650 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc6a11P31650 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.08■□□□□ 0.81
Slc6a11P31650 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Slc6a11P31650 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.08■□□□□ 0.81
Slc6a11P31650 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Slc6a11P31650 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slc6a11P31650 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slc6a11P31650 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Slc6a11P31650 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slc6a11P31650 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a11P31650 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a11P31650 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a11P31650 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a11P31650 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.07■□□□□ 0.8
Slc6a11P31650 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Slc6a11P31650 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a11P31650 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a11P31650 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a11P31650 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a11P31650 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Slc6a11P31650 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Slc6a11P31650 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Slc6a11P31650 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc6a11P31650 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc6a11P31650 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Slc6a11P31650 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a11P31650 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Slc6a11P31650 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Slc6a11P31650 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a11P31650 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Slc6a11P31650 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a11P31650 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Slc6a11P31650 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Slc6a11P31650 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc6a11P31650 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.04■□□□□ 0.8
Slc6a11P31650 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc6a11P31650 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Slc6a11P31650 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc6a11P31650 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc6a11P31650 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Slc6a11P31650 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Slc6a11P31650 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.03■□□□□ 0.8
Slc6a11P31650 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.03■□□□□ 0.8
Slc6a11P31650 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Slc6a11P31650 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc6a11P31650 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc6a11P31650 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Slc6a11P31650 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.02■□□□□ 0.8
Slc6a11P31650 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc6a11P31650 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc6a11P31650 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.02■□□□□ 0.79
Slc6a11P31650 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms