Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm37136-201ENSMUST00000194368 194 ntBASIC19.71■□□□□ 0.75
Nedd8P29595 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.71■□□□□ 0.75
Nedd8P29595 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nedd8P29595 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nedd8P29595 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Nedd8P29595 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nedd8P29595 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Nedd8P29595 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Nedd8P29595 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nedd8P29595 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nedd8P29595 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nedd8P29595 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Nedd8P29595 Gm24970-201ENSMUST00000175582 82 ntBASIC19.69■□□□□ 0.74
Nedd8P29595 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.69■□□□□ 0.74
Nedd8P29595 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nedd8P29595 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nedd8P29595 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nedd8P29595 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nedd8P29595 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Nedd8P29595 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nedd8P29595 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nedd8P29595 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nedd8P29595 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nedd8P29595 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nedd8P29595 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nedd8P29595 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nedd8P29595 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nedd8P29595 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nedd8P29595 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nedd8P29595 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nedd8P29595 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.66■□□□□ 0.74
Nedd8P29595 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nedd8P29595 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.65■□□□□ 0.74
Nedd8P29595 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Nedd8P29595 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.65■□□□□ 0.74
Nedd8P29595 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.65■□□□□ 0.74
Nedd8P29595 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Nedd8P29595 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nedd8P29595 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nedd8P29595 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nedd8P29595 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nedd8P29595 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nedd8P29595 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nedd8P29595 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nedd8P29595 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nedd8P29595 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nedd8P29595 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nedd8P29595 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nedd8P29595 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nedd8P29595 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nedd8P29595 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nedd8P29595 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nedd8P29595 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nedd8P29595 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nedd8P29595 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nedd8P29595 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nedd8P29595 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nedd8P29595 Zfp131-205ENSMUST00000223812 663 ntBASIC19.62■□□□□ 0.73
Nedd8P29595 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Nedd8P29595 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nedd8P29595 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Nedd8P29595 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nedd8P29595 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nedd8P29595 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nedd8P29595 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.61■□□□□ 0.73
Nedd8P29595 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nedd8P29595 Golph3-202ENSMUST00000226517 2359 ntBASIC19.61■□□□□ 0.73
Nedd8P29595 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nedd8P29595 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nedd8P29595 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nedd8P29595 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nedd8P29595 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nedd8P29595 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nedd8P29595 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nedd8P29595 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nedd8P29595 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nedd8P29595 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nedd8P29595 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Nedd8P29595 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.58■□□□□ 0.72
Nedd8P29595 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nedd8P29595 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nedd8P29595 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nedd8P29595 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Nedd8P29595 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Nedd8P29595 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nedd8P29595 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nedd8P29595 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
Nedd8P29595 Gm9397-201ENSMUST00000200125 605 ntBASIC19.57■□□□□ 0.72
Nedd8P29595 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nedd8P29595 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.57■□□□□ 0.72
Nedd8P29595 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Nedd8P29595 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.57■□□□□ 0.72
Nedd8P29595 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nedd8P29595 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Nedd8P29595 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nedd8P29595 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nedd8P29595 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nedd8P29595 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nedd8P29595 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nedd8P29595 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms