Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cbx3P23198 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cbx3P23198 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cbx3P23198 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cbx3P23198 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cbx3P23198 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.23■□□□□ 0.67
Cbx3P23198 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cbx3P23198 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cbx3P23198 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Cbx3P23198 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cbx3P23198 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cbx3P23198 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Cbx3P23198 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cbx3P23198 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.21■□□□□ 0.67
Cbx3P23198 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.21■□□□□ 0.67
Cbx3P23198 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cbx3P23198 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cbx3P23198 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cbx3P23198 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cbx3P23198 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cbx3P23198 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Cbx3P23198 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cbx3P23198 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Cbx3P23198 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cbx3P23198 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cbx3P23198 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cbx3P23198 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cbx3P23198 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cbx3P23198 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cbx3P23198 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cbx3P23198 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cbx3P23198 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Cbx3P23198 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cbx3P23198 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cbx3P23198 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.18■□□□□ 0.66
Cbx3P23198 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cbx3P23198 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cbx3P23198 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cbx3P23198 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cbx3P23198 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cbx3P23198 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Cbx3P23198 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.18■□□□□ 0.66
Cbx3P23198 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cbx3P23198 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cbx3P23198 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cbx3P23198 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cbx3P23198 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cbx3P23198 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cbx3P23198 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Cbx3P23198 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cbx3P23198 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.17■□□□□ 0.66
Cbx3P23198 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Cbx3P23198 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cbx3P23198 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cbx3P23198 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cbx3P23198 Gm30023-201ENSMUST00000197970 889 ntBASIC19.16■□□□□ 0.66
Cbx3P23198 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cbx3P23198 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Cbx3P23198 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cbx3P23198 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cbx3P23198 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cbx3P23198 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cbx3P23198 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Cbx3P23198 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cbx3P23198 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cbx3P23198 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cbx3P23198 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cbx3P23198 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cbx3P23198 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cbx3P23198 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cbx3P23198 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.14■□□□□ 0.65
Cbx3P23198 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cbx3P23198 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cbx3P23198 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.14■□□□□ 0.65
Cbx3P23198 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cbx3P23198 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cbx3P23198 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cbx3P23198 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cbx3P23198 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cbx3P23198 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cbx3P23198 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cbx3P23198 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cbx3P23198 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cbx3P23198 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cbx3P23198 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cbx3P23198 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cbx3P23198 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.12■□□□□ 0.65
Cbx3P23198 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cbx3P23198 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cbx3P23198 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Cbx3P23198 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cbx3P23198 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cbx3P23198 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cbx3P23198 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cbx3P23198 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cbx3P23198 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Cbx3P23198 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cbx3P23198 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Cbx3P23198 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cbx3P23198 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms