Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clk1P22518 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Clk1P22518 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clk1P22518 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clk1P22518 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Clk1P22518 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clk1P22518 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Clk1P22518 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clk1P22518 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clk1P22518 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.64■□□□□ 0.73
Clk1P22518 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.64■□□□□ 0.73
Clk1P22518 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.64■□□□□ 0.73
Clk1P22518 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clk1P22518 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clk1P22518 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
Clk1P22518 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Clk1P22518 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clk1P22518 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.63■□□□□ 0.73
Clk1P22518 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.63■□□□□ 0.73
Clk1P22518 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clk1P22518 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clk1P22518 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Clk1P22518 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clk1P22518 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clk1P22518 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clk1P22518 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.62■□□□□ 0.73
Clk1P22518 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clk1P22518 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.62■□□□□ 0.73
Clk1P22518 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clk1P22518 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clk1P22518 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.61■□□□□ 0.73
Clk1P22518 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clk1P22518 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.61■□□□□ 0.73
Clk1P22518 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Clk1P22518 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.61■□□□□ 0.73
Clk1P22518 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clk1P22518 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Clk1P22518 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clk1P22518 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clk1P22518 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clk1P22518 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Clk1P22518 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clk1P22518 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Clk1P22518 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Clk1P22518 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clk1P22518 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clk1P22518 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clk1P22518 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clk1P22518 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Clk1P22518 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clk1P22518 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Clk1P22518 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Clk1P22518 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Clk1P22518 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Clk1P22518 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Clk1P22518 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Clk1P22518 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Clk1P22518 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.58■□□□□ 0.72
Clk1P22518 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Clk1P22518 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
Clk1P22518 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clk1P22518 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Clk1P22518 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.57■□□□□ 0.72
Clk1P22518 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clk1P22518 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Clk1P22518 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Clk1P22518 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clk1P22518 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Clk1P22518 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Clk1P22518 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.56■□□□□ 0.72
Clk1P22518 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Clk1P22518 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Clk1P22518 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Clk1P22518 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.56■□□□□ 0.72
Clk1P22518 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.56■□□□□ 0.72
Clk1P22518 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Clk1P22518 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Clk1P22518 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clk1P22518 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clk1P22518 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Clk1P22518 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clk1P22518 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clk1P22518 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clk1P22518 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Clk1P22518 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clk1P22518 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Clk1P22518 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clk1P22518 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.54■□□□□ 0.72
Clk1P22518 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clk1P22518 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Clk1P22518 Iqck-206ENSMUST00000208658 2891 ntBASIC19.54■□□□□ 0.72
Clk1P22518 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Clk1P22518 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clk1P22518 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Clk1P22518 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Clk1P22518 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.53■□□□□ 0.72
Clk1P22518 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Clk1P22518 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clk1P22518 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Clk1P22518 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms