Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PrnpP04925 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PrnpP04925 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PrnpP04925 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
PrnpP04925 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC22.37■■□□□ 1.17
PrnpP04925 Golgb1-201ENSMUST00000023534 498 ntBASIC22.37■■□□□ 1.17
PrnpP04925 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC22.37■■□□□ 1.17
PrnpP04925 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PrnpP04925 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PrnpP04925 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC22.36■■□□□ 1.17
PrnpP04925 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC22.36■■□□□ 1.17
PrnpP04925 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC22.36■■□□□ 1.17
PrnpP04925 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PrnpP04925 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PrnpP04925 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
PrnpP04925 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PrnpP04925 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PrnpP04925 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
PrnpP04925 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.34■■□□□ 1.17
PrnpP04925 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
PrnpP04925 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
PrnpP04925 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PrnpP04925 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PrnpP04925 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC22.34■■□□□ 1.17
PrnpP04925 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PrnpP04925 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
PrnpP04925 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PrnpP04925 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PrnpP04925 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC22.34■■□□□ 1.17
PrnpP04925 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PrnpP04925 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PrnpP04925 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
PrnpP04925 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
PrnpP04925 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PrnpP04925 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PrnpP04925 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PrnpP04925 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PrnpP04925 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PrnpP04925 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
PrnpP04925 Gm27454-201ENSMUST00000185090 204 ntBASIC22.32■■□□□ 1.16
PrnpP04925 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
PrnpP04925 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PrnpP04925 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PrnpP04925 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC22.31■■□□□ 1.16
PrnpP04925 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PrnpP04925 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PrnpP04925 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PrnpP04925 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PrnpP04925 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PrnpP04925 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PrnpP04925 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PrnpP04925 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
PrnpP04925 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PrnpP04925 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PrnpP04925 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
PrnpP04925 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
PrnpP04925 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PrnpP04925 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
PrnpP04925 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PrnpP04925 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC22.28■■□□□ 1.16
PrnpP04925 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC22.28■■□□□ 1.16
PrnpP04925 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC22.28■■□□□ 1.16
PrnpP04925 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC22.28■■□□□ 1.16
PrnpP04925 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PrnpP04925 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PrnpP04925 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PrnpP04925 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
PrnpP04925 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PrnpP04925 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PrnpP04925 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC22.27■■□□□ 1.16
PrnpP04925 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
PrnpP04925 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22.27■■□□□ 1.15
PrnpP04925 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PrnpP04925 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC22.26■■□□□ 1.15
PrnpP04925 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
PrnpP04925 Gm45417-201ENSMUST00000209533 758 ntBASIC22.25■■□□□ 1.15
PrnpP04925 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PrnpP04925 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PrnpP04925 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PrnpP04925 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PrnpP04925 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC22.24■■□□□ 1.15
PrnpP04925 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PrnpP04925 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PrnpP04925 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC22.23■■□□□ 1.15
PrnpP04925 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC22.23■■□□□ 1.15
PrnpP04925 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PrnpP04925 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PrnpP04925 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC22.22■■□□□ 1.15
PrnpP04925 AC116713.1-201ENSMUST00000215074 430 ntBASIC22.22■■□□□ 1.15
PrnpP04925 Serp2-204ENSMUST00000228055 705 ntBASIC22.22■■□□□ 1.15
PrnpP04925 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PrnpP04925 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PrnpP04925 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PrnpP04925 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PrnpP04925 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PrnpP04925 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PrnpP04925 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PrnpP04925 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PrnpP04925 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
PrnpP04925 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.2■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms