Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Hoxa3P02831 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxa3P02831 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.81■□□□□ 0.44
Hoxa3P02831 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Hoxa3P02831 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.81■□□□□ 0.44
Hoxa3P02831 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxa3P02831 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxa3P02831 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxa3P02831 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Hoxa3P02831 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxa3P02831 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxa3P02831 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxa3P02831 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxa3P02831 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxa3P02831 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.79■□□□□ 0.44
Hoxa3P02831 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.79■□□□□ 0.44
Hoxa3P02831 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Hoxa3P02831 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Hoxa3P02831 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
Hoxa3P02831 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxa3P02831 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxa3P02831 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Hoxa3P02831 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxa3P02831 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxa3P02831 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxa3P02831 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxa3P02831 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxa3P02831 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxa3P02831 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.77■□□□□ 0.44
Hoxa3P02831 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxa3P02831 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Hoxa3P02831 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hoxa3P02831 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Hoxa3P02831 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hoxa3P02831 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxa3P02831 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.76■□□□□ 0.43
Hoxa3P02831 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxa3P02831 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxa3P02831 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.76■□□□□ 0.43
Hoxa3P02831 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.76■□□□□ 0.43
Hoxa3P02831 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxa3P02831 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxa3P02831 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxa3P02831 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Hoxa3P02831 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxa3P02831 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxa3P02831 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxa3P02831 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxa3P02831 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Hoxa3P02831 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.75■□□□□ 0.43
Hoxa3P02831 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxa3P02831 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Hoxa3P02831 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Hoxa3P02831 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxa3P02831 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxa3P02831 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxa3P02831 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxa3P02831 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxa3P02831 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.74■□□□□ 0.43
Hoxa3P02831 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Hoxa3P02831 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxa3P02831 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Hoxa3P02831 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxa3P02831 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxa3P02831 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Hoxa3P02831 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Hoxa3P02831 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxa3P02831 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxa3P02831 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxa3P02831 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Hoxa3P02831 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxa3P02831 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.72■□□□□ 0.43
Hoxa3P02831 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxa3P02831 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxa3P02831 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Hoxa3P02831 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.72■□□□□ 0.43
Hoxa3P02831 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxa3P02831 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxa3P02831 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxa3P02831 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.72■□□□□ 0.43
Hoxa3P02831 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxa3P02831 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Hoxa3P02831 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxa3P02831 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxa3P02831 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Hoxa3P02831 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxa3P02831 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxa3P02831 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.71■□□□□ 0.43
Hoxa3P02831 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxa3P02831 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxa3P02831 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxa3P02831 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxa3P02831 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxa3P02831 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxa3P02831 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.42
Hoxa3P02831 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxa3P02831 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.7■□□□□ 0.42
Hoxa3P02831 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.7■□□□□ 0.42
Hoxa3P02831 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxa3P02831 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms