Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Abcd4O89016 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Abcd4O89016 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Abcd4O89016 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Abcd4O89016 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Abcd4O89016 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.17■□□□□ 0.66
Abcd4O89016 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Abcd4O89016 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Abcd4O89016 Gm9959-201ENSMUST00000068277 390 ntBASIC19.17■□□□□ 0.66
Abcd4O89016 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Abcd4O89016 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Abcd4O89016 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.17■□□□□ 0.66
Abcd4O89016 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Abcd4O89016 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Abcd4O89016 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Abcd4O89016 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.15■□□□□ 0.66
Abcd4O89016 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Abcd4O89016 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Abcd4O89016 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Abcd4O89016 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Abcd4O89016 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Abcd4O89016 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Abcd4O89016 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Abcd4O89016 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Abcd4O89016 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Abcd4O89016 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Abcd4O89016 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Abcd4O89016 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Abcd4O89016 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.14■□□□□ 0.65
Abcd4O89016 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Abcd4O89016 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Abcd4O89016 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Abcd4O89016 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Abcd4O89016 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.13■□□□□ 0.65
Abcd4O89016 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Abcd4O89016 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Abcd4O89016 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Abcd4O89016 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Abcd4O89016 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Abcd4O89016 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Abcd4O89016 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Abcd4O89016 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Abcd4O89016 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Abcd4O89016 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.12■□□□□ 0.65
Abcd4O89016 Etf1-202ENSMUST00000180351 108 ntBASIC19.12■□□□□ 0.65
Abcd4O89016 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Abcd4O89016 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Abcd4O89016 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Abcd4O89016 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Abcd4O89016 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Abcd4O89016 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Abcd4O89016 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Abcd4O89016 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Abcd4O89016 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.11■□□□□ 0.65
Abcd4O89016 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Abcd4O89016 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Abcd4O89016 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Abcd4O89016 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Abcd4O89016 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Abcd4O89016 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Abcd4O89016 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Abcd4O89016 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.11■□□□□ 0.65
Abcd4O89016 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Abcd4O89016 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Abcd4O89016 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Abcd4O89016 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.1■□□□□ 0.65
Abcd4O89016 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Abcd4O89016 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Abcd4O89016 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.1■□□□□ 0.65
Abcd4O89016 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Abcd4O89016 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Abcd4O89016 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
Abcd4O89016 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Abcd4O89016 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Abcd4O89016 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Abcd4O89016 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Abcd4O89016 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Abcd4O89016 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
Abcd4O89016 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Abcd4O89016 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.09■□□□□ 0.65
Abcd4O89016 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Abcd4O89016 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Abcd4O89016 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Abcd4O89016 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Abcd4O89016 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.08■□□□□ 0.64
Abcd4O89016 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.08■□□□□ 0.64
Abcd4O89016 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.08■□□□□ 0.64
Abcd4O89016 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Abcd4O89016 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Abcd4O89016 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
Abcd4O89016 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.07■□□□□ 0.64
Abcd4O89016 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.07■□□□□ 0.64
Abcd4O89016 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Abcd4O89016 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Abcd4O89016 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Abcd4O89016 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Abcd4O89016 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.07■□□□□ 0.64
Abcd4O89016 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Abcd4O89016 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Abcd4O89016 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms