Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC14.97□□□□□ -0.01
Sh2d1aO88890 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh2d1aO88890 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh2d1aO88890 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh2d1aO88890 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC14.97□□□□□ -0.01
Sh2d1aO88890 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC14.97□□□□□ -0.01
Sh2d1aO88890 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sh2d1aO88890 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh2d1aO88890 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh2d1aO88890 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh2d1aO88890 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sh2d1aO88890 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sh2d1aO88890 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sh2d1aO88890 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sh2d1aO88890 Gm7332-201ENSMUST00000118351 454 ntBASIC14.96□□□□□ -0.01
Sh2d1aO88890 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC14.96□□□□□ -0.01
Sh2d1aO88890 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sh2d1aO88890 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC14.96□□□□□ -0.01
Sh2d1aO88890 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Sh2d1aO88890 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sh2d1aO88890 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sh2d1aO88890 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sh2d1aO88890 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sh2d1aO88890 Dmtn-209ENSMUST00000228295 2572 ntBASIC14.96□□□□□ -0.01
Sh2d1aO88890 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.02
Sh2d1aO88890 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sh2d1aO88890 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sh2d1aO88890 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sh2d1aO88890 Gm14523-201ENSMUST00000117260 558 ntBASIC14.95□□□□□ -0.02
Sh2d1aO88890 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sh2d1aO88890 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sh2d1aO88890 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sh2d1aO88890 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sh2d1aO88890 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sh2d1aO88890 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sh2d1aO88890 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sh2d1aO88890 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sh2d1aO88890 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC14.94□□□□□ -0.02
Sh2d1aO88890 AC153962.1-201ENSMUST00000218530 1948 ntBASIC14.94□□□□□ -0.02
Sh2d1aO88890 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC14.94□□□□□ -0.02
Sh2d1aO88890 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sh2d1aO88890 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sh2d1aO88890 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sh2d1aO88890 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh2d1aO88890 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC14.93□□□□□ -0.02
Sh2d1aO88890 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC14.93□□□□□ -0.02
Sh2d1aO88890 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh2d1aO88890 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Sh2d1aO88890 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC14.93□□□□□ -0.02
Sh2d1aO88890 Mir6538-201ENSMUST00000183713 110 ntBASIC14.93□□□□□ -0.02
Sh2d1aO88890 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Sh2d1aO88890 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sh2d1aO88890 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh2d1aO88890 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh2d1aO88890 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Sh2d1aO88890 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh2d1aO88890 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Sh2d1aO88890 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh2d1aO88890 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC14.92□□□□□ -0.02
Sh2d1aO88890 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh2d1aO88890 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh2d1aO88890 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh2d1aO88890 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sh2d1aO88890 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh2d1aO88890 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Sh2d1aO88890 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Sh2d1aO88890 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh2d1aO88890 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC14.91□□□□□ -0.02
Sh2d1aO88890 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh2d1aO88890 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh2d1aO88890 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Sh2d1aO88890 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Sh2d1aO88890 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sh2d1aO88890 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Sh2d1aO88890 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh2d1aO88890 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh2d1aO88890 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sh2d1aO88890 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh2d1aO88890 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh2d1aO88890 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Sh2d1aO88890 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sh2d1aO88890 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Sh2d1aO88890 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC14.9□□□□□ -0.02
Sh2d1aO88890 Gm12366-201ENSMUST00000121722 873 ntBASIC14.9□□□□□ -0.02
Sh2d1aO88890 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC14.9□□□□□ -0.02
Sh2d1aO88890 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC14.9□□□□□ -0.02
Sh2d1aO88890 Gm5786-201ENSMUST00000085368 882 ntBASIC14.9□□□□□ -0.02
Sh2d1aO88890 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sh2d1aO88890 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sh2d1aO88890 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Sh2d1aO88890 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sh2d1aO88890 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sh2d1aO88890 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sh2d1aO88890 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC14.89□□□□□ -0.03
Sh2d1aO88890 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sh2d1aO88890 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sh2d1aO88890 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sh2d1aO88890 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sh2d1aO88890 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sh2d1aO88890 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms