Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cacna1hO88427 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Cacna1hO88427 Gm8493-201ENSMUST00000196881 489 ntBASIC21.4■■□□□ 1.02
Cacna1hO88427 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cacna1hO88427 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cacna1hO88427 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Cacna1hO88427 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.39■■□□□ 1.01
Cacna1hO88427 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Cacna1hO88427 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cacna1hO88427 Gm43173-201ENSMUST00000202246 593 ntBASIC21.38■■□□□ 1.01
Cacna1hO88427 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cacna1hO88427 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cacna1hO88427 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cacna1hO88427 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.37■■□□□ 1.01
Cacna1hO88427 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Cacna1hO88427 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.37■■□□□ 1.01
Cacna1hO88427 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cacna1hO88427 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.37■■□□□ 1.01
Cacna1hO88427 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cacna1hO88427 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Cacna1hO88427 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cacna1hO88427 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cacna1hO88427 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.36■■□□□ 1.01
Cacna1hO88427 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cacna1hO88427 Zxda-201ENSMUST00000117281 2621 ntBASIC21.36■■□□□ 1.01
Cacna1hO88427 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cacna1hO88427 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cacna1hO88427 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
Cacna1hO88427 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cacna1hO88427 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cacna1hO88427 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cacna1hO88427 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.35■■□□□ 1.01
Cacna1hO88427 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cacna1hO88427 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
Cacna1hO88427 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.34■■□□□ 1.01
Cacna1hO88427 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.34■■□□□ 1.01
Cacna1hO88427 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cacna1hO88427 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Cacna1hO88427 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.33■■□□□ 1.01
Cacna1hO88427 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.33■■□□□ 1.01
Cacna1hO88427 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Cacna1hO88427 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Cacna1hO88427 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Cacna1hO88427 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Cacna1hO88427 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cacna1hO88427 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.32■■□□□ 1
Cacna1hO88427 Gm42642-201ENSMUST00000200683 355 ntBASIC21.32■■□□□ 1
Cacna1hO88427 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cacna1hO88427 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cacna1hO88427 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.32■■□□□ 1
Cacna1hO88427 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.32■■□□□ 1
Cacna1hO88427 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cacna1hO88427 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Cacna1hO88427 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cacna1hO88427 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Cacna1hO88427 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cacna1hO88427 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cacna1hO88427 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC21.31■■□□□ 1
Cacna1hO88427 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cacna1hO88427 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cacna1hO88427 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.3■■□□□ 1
Cacna1hO88427 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Cacna1hO88427 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Cacna1hO88427 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cacna1hO88427 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cacna1hO88427 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
Cacna1hO88427 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cacna1hO88427 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cacna1hO88427 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC21.29■■□□□ 1
Cacna1hO88427 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.29■■□□□ 1
Cacna1hO88427 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC21.29■■□□□ 1
Cacna1hO88427 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cacna1hO88427 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.28■■□□□ 1
Cacna1hO88427 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.27■■□□□ 1
Cacna1hO88427 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC21.27■■□□□ 1
Cacna1hO88427 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Cacna1hO88427 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cacna1hO88427 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Cacna1hO88427 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cacna1hO88427 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Cacna1hO88427 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cacna1hO88427 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cacna1hO88427 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Cacna1hO88427 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cacna1hO88427 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
Cacna1hO88427 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cacna1hO88427 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Cacna1hO88427 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cacna1hO88427 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cacna1hO88427 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cacna1hO88427 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cacna1hO88427 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.23■□□□□ 0.99
Cacna1hO88427 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC21.23■□□□□ 0.99
Cacna1hO88427 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC21.23■□□□□ 0.99
Cacna1hO88427 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cacna1hO88427 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.23■□□□□ 0.99
Cacna1hO88427 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cacna1hO88427 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Cacna1hO88427 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Cacna1hO88427 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms