Protein–RNA interactions for Protein: O35324

Sh2d1b, SH2 domain-containing protein 1B, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1bO35324 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sh2d1bO35324 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sh2d1bO35324 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.05■□□□□ 0.8
Sh2d1bO35324 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sh2d1bO35324 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sh2d1bO35324 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.05■□□□□ 0.8
Sh2d1bO35324 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sh2d1bO35324 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sh2d1bO35324 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sh2d1bO35324 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sh2d1bO35324 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.04■□□□□ 0.8
Sh2d1bO35324 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.04■□□□□ 0.8
Sh2d1bO35324 Gm12922-201ENSMUST00000120626 809 ntBASIC20.04■□□□□ 0.8
Sh2d1bO35324 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sh2d1bO35324 Gm13241-201ENSMUST00000094493 780 ntBASIC20.04■□□□□ 0.8
Sh2d1bO35324 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Sh2d1bO35324 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sh2d1bO35324 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sh2d1bO35324 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sh2d1bO35324 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sh2d1bO35324 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.03■□□□□ 0.8
Sh2d1bO35324 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Sh2d1bO35324 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sh2d1bO35324 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sh2d1bO35324 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sh2d1bO35324 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.02■□□□□ 0.8
Sh2d1bO35324 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
Sh2d1bO35324 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Sh2d1bO35324 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sh2d1bO35324 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Sh2d1bO35324 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Sh2d1bO35324 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sh2d1bO35324 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
Sh2d1bO35324 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Sh2d1bO35324 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sh2d1bO35324 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sh2d1bO35324 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sh2d1bO35324 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20■□□□□ 0.79
Sh2d1bO35324 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20■□□□□ 0.79
Sh2d1bO35324 Gm9847-201ENSMUST00000052528 599 ntBASIC20■□□□□ 0.79
Sh2d1bO35324 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sh2d1bO35324 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sh2d1bO35324 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sh2d1bO35324 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sh2d1bO35324 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Sh2d1bO35324 Gm15039-201ENSMUST00000118914 875 ntBASIC19.99■□□□□ 0.79
Sh2d1bO35324 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sh2d1bO35324 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sh2d1bO35324 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sh2d1bO35324 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Sh2d1bO35324 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sh2d1bO35324 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sh2d1bO35324 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.98■□□□□ 0.79
Sh2d1bO35324 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.97■□□□□ 0.79
Sh2d1bO35324 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sh2d1bO35324 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sh2d1bO35324 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sh2d1bO35324 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Sh2d1bO35324 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sh2d1bO35324 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sh2d1bO35324 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sh2d1bO35324 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
Sh2d1bO35324 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.96■□□□□ 0.79
Sh2d1bO35324 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.96■□□□□ 0.79
Sh2d1bO35324 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.96■□□□□ 0.79
Sh2d1bO35324 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Sh2d1bO35324 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sh2d1bO35324 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sh2d1bO35324 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Sh2d1bO35324 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Sh2d1bO35324 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.95■□□□□ 0.78
Sh2d1bO35324 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sh2d1bO35324 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sh2d1bO35324 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sh2d1bO35324 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sh2d1bO35324 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sh2d1bO35324 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
Sh2d1bO35324 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Sh2d1bO35324 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sh2d1bO35324 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Sh2d1bO35324 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sh2d1bO35324 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sh2d1bO35324 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sh2d1bO35324 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sh2d1bO35324 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sh2d1bO35324 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sh2d1bO35324 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sh2d1bO35324 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sh2d1bO35324 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.92■□□□□ 0.78
Sh2d1bO35324 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sh2d1bO35324 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sh2d1bO35324 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sh2d1bO35324 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sh2d1bO35324 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.91■□□□□ 0.78
Sh2d1bO35324 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.91■□□□□ 0.78
Sh2d1bO35324 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.91■□□□□ 0.78
Sh2d1bO35324 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Sh2d1bO35324 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sh2d1bO35324 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sh2d1bO35324 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms