Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC26.27■■□□□ 1.8
Trim34bJ3QNR8 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Trim34bJ3QNR8 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC26.27■■□□□ 1.8
Trim34bJ3QNR8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC26.27■■□□□ 1.8
Trim34bJ3QNR8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
Trim34bJ3QNR8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Trim34bJ3QNR8 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Trim34bJ3QNR8 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Trim34bJ3QNR8 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Trim34bJ3QNR8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Trim34bJ3QNR8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Trim34bJ3QNR8 Gm10620-201ENSMUST00000098379 1332 ntBASIC26.24■■□□□ 1.79
Trim34bJ3QNR8 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC26.24■■□□□ 1.79
Trim34bJ3QNR8 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Trim34bJ3QNR8 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Trim34bJ3QNR8 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Trim34bJ3QNR8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Trim34bJ3QNR8 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Trim34bJ3QNR8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Trim34bJ3QNR8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Trim34bJ3QNR8 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC26.23■■□□□ 1.79
Trim34bJ3QNR8 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Trim34bJ3QNR8 Gm9847-201ENSMUST00000052528 599 ntBASIC26.22■■□□□ 1.79
Trim34bJ3QNR8 Gm13241-201ENSMUST00000094493 780 ntBASIC26.22■■□□□ 1.79
Trim34bJ3QNR8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Trim34bJ3QNR8 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Trim34bJ3QNR8 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Trim34bJ3QNR8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC26.21■■□□□ 1.79
Trim34bJ3QNR8 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Trim34bJ3QNR8 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
Trim34bJ3QNR8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
Trim34bJ3QNR8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
Trim34bJ3QNR8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Trim34bJ3QNR8 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.79
Trim34bJ3QNR8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Trim34bJ3QNR8 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Trim34bJ3QNR8 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Trim34bJ3QNR8 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Trim34bJ3QNR8 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Trim34bJ3QNR8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Trim34bJ3QNR8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Trim34bJ3QNR8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Trim34bJ3QNR8 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Trim34bJ3QNR8 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Trim34bJ3QNR8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Trim34bJ3QNR8 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Trim34bJ3QNR8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Trim34bJ3QNR8 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Trim34bJ3QNR8 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Trim34bJ3QNR8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Trim34bJ3QNR8 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC26.17■■□□□ 1.78
Trim34bJ3QNR8 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Trim34bJ3QNR8 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Trim34bJ3QNR8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Trim34bJ3QNR8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
Trim34bJ3QNR8 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
Trim34bJ3QNR8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Trim34bJ3QNR8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC26.16■■□□□ 1.78
Trim34bJ3QNR8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC26.16■■□□□ 1.78
Trim34bJ3QNR8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Trim34bJ3QNR8 Gm43034-201ENSMUST00000198678 1364 ntBASIC26.16■■□□□ 1.78
Trim34bJ3QNR8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Trim34bJ3QNR8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Trim34bJ3QNR8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Trim34bJ3QNR8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Trim34bJ3QNR8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Trim34bJ3QNR8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Trim34bJ3QNR8 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Trim34bJ3QNR8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
Trim34bJ3QNR8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Trim34bJ3QNR8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Trim34bJ3QNR8 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC26.14■■□□□ 1.78
Trim34bJ3QNR8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Trim34bJ3QNR8 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC26.14■■□□□ 1.78
Trim34bJ3QNR8 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Trim34bJ3QNR8 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Trim34bJ3QNR8 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC26.13■■□□□ 1.77
Trim34bJ3QNR8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Trim34bJ3QNR8 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Trim34bJ3QNR8 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
Trim34bJ3QNR8 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
Trim34bJ3QNR8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Trim34bJ3QNR8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC26.12■■□□□ 1.77
Trim34bJ3QNR8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Trim34bJ3QNR8 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Trim34bJ3QNR8 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
Trim34bJ3QNR8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Trim34bJ3QNR8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
Trim34bJ3QNR8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC26.11■■□□□ 1.77
Trim34bJ3QNR8 Gm12922-201ENSMUST00000120626 809 ntBASIC26.11■■□□□ 1.77
Trim34bJ3QNR8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC26.11■■□□□ 1.77
Trim34bJ3QNR8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Trim34bJ3QNR8 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Trim34bJ3QNR8 Il17rd-202ENSMUST00000223942 2186 ntBASIC26.1■■□□□ 1.77
Trim34bJ3QNR8 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Trim34bJ3QNR8 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Trim34bJ3QNR8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Trim34bJ3QNR8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Trim34bJ3QNR8 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Trim34bJ3QNR8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms