Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm3139J3QK78 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm3139J3QK78 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm3139J3QK78 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm3139J3QK78 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm3139J3QK78 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Gm3139J3QK78 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm3139J3QK78 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Gm3139J3QK78 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Gm3139J3QK78 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Gm3139J3QK78 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.33■■□□□ 1
Gm3139J3QK78 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Gm3139J3QK78 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm3139J3QK78 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm3139J3QK78 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm3139J3QK78 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm3139J3QK78 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.31■■□□□ 1
Gm3139J3QK78 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm3139J3QK78 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm3139J3QK78 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm3139J3QK78 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Gm3139J3QK78 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm3139J3QK78 Gm45102-201ENSMUST00000207427 857 ntBASIC21.31■■□□□ 1
Gm3139J3QK78 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.31■■□□□ 1
Gm3139J3QK78 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.31■■□□□ 1
Gm3139J3QK78 Gm9959-201ENSMUST00000068277 390 ntBASIC21.31■■□□□ 1
Gm3139J3QK78 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm3139J3QK78 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Gm3139J3QK78 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.3■■□□□ 1
Gm3139J3QK78 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.3■■□□□ 1
Gm3139J3QK78 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.3■■□□□ 1
Gm3139J3QK78 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Gm3139J3QK78 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Gm3139J3QK78 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm3139J3QK78 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Gm3139J3QK78 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Gm3139J3QK78 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Gm3139J3QK78 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm3139J3QK78 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.29■■□□□ 1
Gm3139J3QK78 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.29■■□□□ 1
Gm3139J3QK78 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.29■■□□□ 1
Gm3139J3QK78 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm3139J3QK78 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.28■■□□□ 1
Gm3139J3QK78 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Gm3139J3QK78 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm3139J3QK78 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.28■■□□□ 1
Gm3139J3QK78 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.28■■□□□ 1
Gm3139J3QK78 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm3139J3QK78 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.28■■□□□ 1
Gm3139J3QK78 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Gm3139J3QK78 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm3139J3QK78 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm3139J3QK78 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm3139J3QK78 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm3139J3QK78 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Gm3139J3QK78 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm3139J3QK78 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.27■■□□□ 1
Gm3139J3QK78 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Gm3139J3QK78 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm3139J3QK78 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm3139J3QK78 Gm10399-202ENSMUST00000202768 748 ntBASIC21.27■■□□□ 1
Gm3139J3QK78 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm3139J3QK78 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm3139J3QK78 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.27■■□□□ 1
Gm3139J3QK78 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.27■■□□□ 1
Gm3139J3QK78 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Gm3139J3QK78 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Gm3139J3QK78 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm3139J3QK78 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm3139J3QK78 Gm14117-201ENSMUST00000122417 843 ntBASIC21.26■□□□□ 0.99
Gm3139J3QK78 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm3139J3QK78 Etf1-202ENSMUST00000180351 108 ntBASIC21.26■□□□□ 0.99
Gm3139J3QK78 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Gm3139J3QK78 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm3139J3QK78 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm3139J3QK78 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Gm3139J3QK78 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.25■□□□□ 0.99
Gm3139J3QK78 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.25■□□□□ 0.99
Gm3139J3QK78 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.25■□□□□ 0.99
Gm3139J3QK78 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm3139J3QK78 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm3139J3QK78 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm3139J3QK78 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm3139J3QK78 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm3139J3QK78 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.24■□□□□ 0.99
Gm3139J3QK78 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm3139J3QK78 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm3139J3QK78 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.23■□□□□ 0.99
Gm3139J3QK78 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.23■□□□□ 0.99
Gm3139J3QK78 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.23■□□□□ 0.99
Gm3139J3QK78 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm3139J3QK78 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Gm3139J3QK78 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm3139J3QK78 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Gm3139J3QK78 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.22■□□□□ 0.99
Gm3139J3QK78 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.22■□□□□ 0.99
Gm3139J3QK78 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Gm3139J3QK78 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Gm3139J3QK78 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm3139J3QK78 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms