Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Ccdc149F6V035 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc149F6V035 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Ccdc149F6V035 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc149F6V035 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc149F6V035 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc149F6V035 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc149F6V035 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.69■■□□□ 1.06
Ccdc149F6V035 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc149F6V035 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc149F6V035 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc149F6V035 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc149F6V035 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Ccdc149F6V035 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc149F6V035 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc149F6V035 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc149F6V035 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc149F6V035 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Ccdc149F6V035 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc149F6V035 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc149F6V035 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc149F6V035 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.67■■□□□ 1.06
Ccdc149F6V035 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.67■■□□□ 1.06
Ccdc149F6V035 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Ccdc149F6V035 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc149F6V035 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc149F6V035 Gm13241-201ENSMUST00000094493 780 ntBASIC21.67■■□□□ 1.06
Ccdc149F6V035 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.67■■□□□ 1.06
Ccdc149F6V035 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc149F6V035 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc149F6V035 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.66■■□□□ 1.06
Ccdc149F6V035 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc149F6V035 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Ccdc149F6V035 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc149F6V035 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.65■■□□□ 1.06
Ccdc149F6V035 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc149F6V035 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc149F6V035 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc149F6V035 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc149F6V035 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc149F6V035 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ccdc149F6V035 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ccdc149F6V035 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Ccdc149F6V035 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ccdc149F6V035 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc149F6V035 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc149F6V035 Gm9847-201ENSMUST00000052528 599 ntBASIC21.64■■□□□ 1.05
Ccdc149F6V035 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc149F6V035 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc149F6V035 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.63■■□□□ 1.05
Ccdc149F6V035 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc149F6V035 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc149F6V035 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc149F6V035 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc149F6V035 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc149F6V035 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.62■■□□□ 1.05
Ccdc149F6V035 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc149F6V035 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc149F6V035 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc149F6V035 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Ccdc149F6V035 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Ccdc149F6V035 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Ccdc149F6V035 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc149F6V035 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Ccdc149F6V035 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc149F6V035 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Ccdc149F6V035 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc149F6V035 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc149F6V035 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.6■■□□□ 1.05
Ccdc149F6V035 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc149F6V035 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc149F6V035 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc149F6V035 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc149F6V035 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc149F6V035 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc149F6V035 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.6■■□□□ 1.05
Ccdc149F6V035 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc149F6V035 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc149F6V035 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc149F6V035 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc149F6V035 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ccdc149F6V035 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ccdc149F6V035 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ccdc149F6V035 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
Ccdc149F6V035 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ccdc149F6V035 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ccdc149F6V035 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc149F6V035 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc149F6V035 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc149F6V035 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Ccdc149F6V035 Gm12922-201ENSMUST00000120626 809 ntBASIC21.57■■□□□ 1.04
Ccdc149F6V035 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.57■■□□□ 1.04
Ccdc149F6V035 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.57■■□□□ 1.04
Ccdc149F6V035 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc149F6V035 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc149F6V035 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Ccdc149F6V035 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc149F6V035 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc149F6V035 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.56■■□□□ 1.04
Ccdc149F6V035 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms