Protein–RNA interactions for Protein: E9PY46

Ift140, Intraflagellar transport protein 140 homolog, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift140E9PY46 Spcs1-207ENSMUST00000228767 1008 ntBASIC34.98■■■■□ 3.19
Ift140E9PY46 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC34.98■■■■□ 3.19
Ift140E9PY46 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC34.97■■■■□ 3.19
Ift140E9PY46 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
Ift140E9PY46 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC34.97■■■■□ 3.19
Ift140E9PY46 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
Ift140E9PY46 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC34.96■■■■□ 3.19
Ift140E9PY46 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
Ift140E9PY46 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC34.96■■■■□ 3.19
Ift140E9PY46 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC34.96■■■■□ 3.19
Ift140E9PY46 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
Ift140E9PY46 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC34.95■■■■□ 3.19
Ift140E9PY46 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC34.95■■■■□ 3.19
Ift140E9PY46 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC34.94■■■■□ 3.18
Ift140E9PY46 Gm43137-201ENSMUST00000198052 594 ntBASIC34.94■■■■□ 3.18
Ift140E9PY46 Gm5874-201ENSMUST00000096101 508 ntBASIC34.94■■■■□ 3.18
Ift140E9PY46 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
Ift140E9PY46 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
Ift140E9PY46 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC34.93■■■■□ 3.18
Ift140E9PY46 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC34.93■■■■□ 3.18
Ift140E9PY46 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
Ift140E9PY46 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
Ift140E9PY46 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
Ift140E9PY46 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC34.91■■■■□ 3.18
Ift140E9PY46 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
Ift140E9PY46 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC34.91■■■■□ 3.18
Ift140E9PY46 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC34.9■■■■□ 3.18
Ift140E9PY46 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
Ift140E9PY46 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC34.9■■■■□ 3.18
Ift140E9PY46 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
Ift140E9PY46 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
Ift140E9PY46 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC34.9■■■■□ 3.18
Ift140E9PY46 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
Ift140E9PY46 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
Ift140E9PY46 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
Ift140E9PY46 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
Ift140E9PY46 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC34.88■■■■□ 3.17
Ift140E9PY46 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
Ift140E9PY46 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
Ift140E9PY46 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
Ift140E9PY46 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC34.87■■■■□ 3.17
Ift140E9PY46 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
Ift140E9PY46 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
Ift140E9PY46 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
Ift140E9PY46 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC34.86■■■■□ 3.17
Ift140E9PY46 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC34.85■■■■□ 3.17
Ift140E9PY46 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC34.85■■■■□ 3.17
Ift140E9PY46 Mir7075-201ENSMUST00000184187 82 ntBASIC34.84■■■■□ 3.17
Ift140E9PY46 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
Ift140E9PY46 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC34.84■■■■□ 3.17
Ift140E9PY46 Gm7291-201ENSMUST00000199147 382 ntBASIC34.84■■■■□ 3.17
Ift140E9PY46 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
Ift140E9PY46 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC34.83■■■■□ 3.17
Ift140E9PY46 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
Ift140E9PY46 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC34.82■■■■□ 3.16
Ift140E9PY46 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
Ift140E9PY46 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
Ift140E9PY46 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
Ift140E9PY46 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC34.8■■■■□ 3.16
Ift140E9PY46 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC34.8■■■■□ 3.16
Ift140E9PY46 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
Ift140E9PY46 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
Ift140E9PY46 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC34.79■■■■□ 3.16
Ift140E9PY46 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC34.79■■■■□ 3.16
Ift140E9PY46 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC34.79■■■■□ 3.16
Ift140E9PY46 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
Ift140E9PY46 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC34.78■■■■□ 3.16
Ift140E9PY46 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC34.78■■■■□ 3.16
Ift140E9PY46 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC34.78■■■■□ 3.16
Ift140E9PY46 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
Ift140E9PY46 AC122428.3-201ENSMUST00000215551 2290 ntBASIC34.77■■■■□ 3.16
Ift140E9PY46 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC34.77■■■■□ 3.16
Ift140E9PY46 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC34.76■■■■□ 3.16
Ift140E9PY46 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC34.76■■■■□ 3.16
Ift140E9PY46 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
Ift140E9PY46 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.15
Ift140E9PY46 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.15
Ift140E9PY46 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC34.75■■■■□ 3.15
Ift140E9PY46 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
Ift140E9PY46 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
Ift140E9PY46 Gm43173-201ENSMUST00000202246 593 ntBASIC34.75■■■■□ 3.15
Ift140E9PY46 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC34.75■■■■□ 3.15
Ift140E9PY46 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
Ift140E9PY46 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC34.73■■■■□ 3.15
Ift140E9PY46 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
Ift140E9PY46 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC34.72■■■■□ 3.15
Ift140E9PY46 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC34.72■■■■□ 3.15
Ift140E9PY46 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC34.71■■■■□ 3.15
Ift140E9PY46 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
Ift140E9PY46 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
Ift140E9PY46 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC34.71■■■■□ 3.15
Ift140E9PY46 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
Ift140E9PY46 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC34.7■■■■□ 3.15
Ift140E9PY46 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
Ift140E9PY46 Gm8493-201ENSMUST00000196881 489 ntBASIC34.7■■■■□ 3.15
Ift140E9PY46 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.14
Ift140E9PY46 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC34.7■■■■□ 3.14
Ift140E9PY46 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
Ift140E9PY46 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
Ift140E9PY46 Gm9870-201ENSMUST00000063874 645 ntBASIC34.69■■■■□ 3.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms