Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm28043E0CXC2 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.18■□□□□ 0.98
Gm28043E0CXC2 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.18■□□□□ 0.98
Gm28043E0CXC2 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Gm28043E0CXC2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Gm28043E0CXC2 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.18■□□□□ 0.98
Gm28043E0CXC2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
Gm28043E0CXC2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Gm28043E0CXC2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Gm28043E0CXC2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.17■□□□□ 0.98
Gm28043E0CXC2 Gm27502-201ENSMUST00000183495 199 ntBASIC21.17■□□□□ 0.98
Gm28043E0CXC2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.17■□□□□ 0.98
Gm28043E0CXC2 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Gm28043E0CXC2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm28043E0CXC2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm28043E0CXC2 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm28043E0CXC2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm28043E0CXC2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm28043E0CXC2 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm28043E0CXC2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Gm28043E0CXC2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm28043E0CXC2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Gm28043E0CXC2 Gm14523-201ENSMUST00000117260 558 ntBASIC21.16■□□□□ 0.98
Gm28043E0CXC2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.16■□□□□ 0.98
Gm28043E0CXC2 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Gm28043E0CXC2 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.16■□□□□ 0.98
Gm28043E0CXC2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm28043E0CXC2 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm28043E0CXC2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm28043E0CXC2 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Gm28043E0CXC2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm28043E0CXC2 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm28043E0CXC2 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Gm28043E0CXC2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Gm28043E0CXC2 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm28043E0CXC2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
Gm28043E0CXC2 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm28043E0CXC2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm28043E0CXC2 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Gm28043E0CXC2 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.13■□□□□ 0.97
Gm28043E0CXC2 Gm12366-201ENSMUST00000121722 873 ntBASIC21.13■□□□□ 0.97
Gm28043E0CXC2 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.13■□□□□ 0.97
Gm28043E0CXC2 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.13■□□□□ 0.97
Gm28043E0CXC2 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.13■□□□□ 0.97
Gm28043E0CXC2 Gm5786-201ENSMUST00000085368 882 ntBASIC21.13■□□□□ 0.97
Gm28043E0CXC2 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Gm28043E0CXC2 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm28043E0CXC2 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm28043E0CXC2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.12■□□□□ 0.97
Gm28043E0CXC2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Gm28043E0CXC2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Gm28043E0CXC2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm28043E0CXC2 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Gm28043E0CXC2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm28043E0CXC2 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm28043E0CXC2 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Gm28043E0CXC2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.12■□□□□ 0.97
Gm28043E0CXC2 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm28043E0CXC2 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm28043E0CXC2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.11■□□□□ 0.97
Gm28043E0CXC2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm28043E0CXC2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm28043E0CXC2 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.1■□□□□ 0.97
Gm28043E0CXC2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm28043E0CXC2 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm28043E0CXC2 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Gm28043E0CXC2 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm28043E0CXC2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm28043E0CXC2 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Gm28043E0CXC2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Gm28043E0CXC2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Gm28043E0CXC2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm28043E0CXC2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.09■□□□□ 0.97
Gm28043E0CXC2 Gm7332-201ENSMUST00000118351 454 ntBASIC21.09■□□□□ 0.97
Gm28043E0CXC2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.09■□□□□ 0.97
Gm28043E0CXC2 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm28043E0CXC2 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm28043E0CXC2 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gm28043E0CXC2 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Gm28043E0CXC2 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gm28043E0CXC2 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Gm28043E0CXC2 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Gm28043E0CXC2 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Gm28043E0CXC2 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gm28043E0CXC2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gm28043E0CXC2 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Gm28043E0CXC2 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Gm28043E0CXC2 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Gm28043E0CXC2 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Gm28043E0CXC2 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm28043E0CXC2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm28043E0CXC2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm28043E0CXC2 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Gm28043E0CXC2 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Gm28043E0CXC2 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm28043E0CXC2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.06■□□□□ 0.96
Gm28043E0CXC2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.06■□□□□ 0.96
Gm28043E0CXC2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Gm28043E0CXC2 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Gm28043E0CXC2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms