Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shank1D3YZU1 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.15■□□□□ 0.66
Shank1D3YZU1 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Shank1D3YZU1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Shank1D3YZU1 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Shank1D3YZU1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.14■□□□□ 0.65
Shank1D3YZU1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.14■□□□□ 0.65
Shank1D3YZU1 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Shank1D3YZU1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Shank1D3YZU1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Shank1D3YZU1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Shank1D3YZU1 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Shank1D3YZU1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
Shank1D3YZU1 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shank1D3YZU1 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shank1D3YZU1 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.13■□□□□ 0.65
Shank1D3YZU1 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shank1D3YZU1 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.13■□□□□ 0.65
Shank1D3YZU1 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.13■□□□□ 0.65
Shank1D3YZU1 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.13■□□□□ 0.65
Shank1D3YZU1 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shank1D3YZU1 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Shank1D3YZU1 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Shank1D3YZU1 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shank1D3YZU1 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shank1D3YZU1 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Shank1D3YZU1 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shank1D3YZU1 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Shank1D3YZU1 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shank1D3YZU1 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.12■□□□□ 0.65
Shank1D3YZU1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shank1D3YZU1 Gm6139-201ENSMUST00000079261 882 ntBASIC19.12■□□□□ 0.65
Shank1D3YZU1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Shank1D3YZU1 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Shank1D3YZU1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Shank1D3YZU1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Shank1D3YZU1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Shank1D3YZU1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.11■□□□□ 0.65
Shank1D3YZU1 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Shank1D3YZU1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Shank1D3YZU1 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Shank1D3YZU1 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Shank1D3YZU1 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Shank1D3YZU1 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Shank1D3YZU1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.1■□□□□ 0.65
Shank1D3YZU1 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Shank1D3YZU1 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Shank1D3YZU1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.09■□□□□ 0.65
Shank1D3YZU1 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Shank1D3YZU1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Shank1D3YZU1 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Shank1D3YZU1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Shank1D3YZU1 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Shank1D3YZU1 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Shank1D3YZU1 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Shank1D3YZU1 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Shank1D3YZU1 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.65
Shank1D3YZU1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Shank1D3YZU1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Shank1D3YZU1 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Shank1D3YZU1 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Shank1D3YZU1 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Shank1D3YZU1 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.07■□□□□ 0.64
Shank1D3YZU1 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Shank1D3YZU1 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Shank1D3YZU1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Shank1D3YZU1 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
Shank1D3YZU1 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shank1D3YZU1 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shank1D3YZU1 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shank1D3YZU1 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shank1D3YZU1 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
Shank1D3YZU1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.06■□□□□ 0.64
Shank1D3YZU1 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
Shank1D3YZU1 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shank1D3YZU1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Shank1D3YZU1 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shank1D3YZU1 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.05■□□□□ 0.64
Shank1D3YZU1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shank1D3YZU1 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.05■□□□□ 0.64
Shank1D3YZU1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Shank1D3YZU1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Shank1D3YZU1 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Shank1D3YZU1 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shank1D3YZU1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shank1D3YZU1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shank1D3YZU1 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Shank1D3YZU1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shank1D3YZU1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Shank1D3YZU1 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shank1D3YZU1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shank1D3YZU1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Shank1D3YZU1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.03■□□□□ 0.64
Shank1D3YZU1 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.03■□□□□ 0.64
Shank1D3YZU1 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shank1D3YZU1 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shank1D3YZU1 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Shank1D3YZU1 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Shank1D3YZU1 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.03■□□□□ 0.64
Shank1D3YZU1 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms