Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav13n-4A0A0G2JG01 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.15■□□□□ 0.34
Trav13n-4A0A0G2JG01 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav13n-4A0A0G2JG01 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav13n-4A0A0G2JG01 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav13n-4A0A0G2JG01 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav13n-4A0A0G2JG01 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.14■□□□□ 0.33
Trav13n-4A0A0G2JG01 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav13n-4A0A0G2JG01 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav13n-4A0A0G2JG01 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav13n-4A0A0G2JG01 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav13n-4A0A0G2JG01 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav13n-4A0A0G2JG01 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.13■□□□□ 0.33
Trav13n-4A0A0G2JG01 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.13■□□□□ 0.33
Trav13n-4A0A0G2JG01 Rps24-207ENSMUST00000224568 714 ntBASIC17.13■□□□□ 0.33
Trav13n-4A0A0G2JG01 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.13■□□□□ 0.33
Trav13n-4A0A0G2JG01 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav13n-4A0A0G2JG01 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav13n-4A0A0G2JG01 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav13n-4A0A0G2JG01 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav13n-4A0A0G2JG01 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav13n-4A0A0G2JG01 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav13n-4A0A0G2JG01 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.13■□□□□ 0.33
Trav13n-4A0A0G2JG01 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav13n-4A0A0G2JG01 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.12■□□□□ 0.33
Trav13n-4A0A0G2JG01 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav13n-4A0A0G2JG01 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.12■□□□□ 0.33
Trav13n-4A0A0G2JG01 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Trav13n-4A0A0G2JG01 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav13n-4A0A0G2JG01 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trav13n-4A0A0G2JG01 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.12■□□□□ 0.33
Trav13n-4A0A0G2JG01 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.11■□□□□ 0.33
Trav13n-4A0A0G2JG01 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Trav13n-4A0A0G2JG01 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav13n-4A0A0G2JG01 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav13n-4A0A0G2JG01 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav13n-4A0A0G2JG01 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.11■□□□□ 0.33
Trav13n-4A0A0G2JG01 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.11■□□□□ 0.33
Trav13n-4A0A0G2JG01 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav13n-4A0A0G2JG01 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav13n-4A0A0G2JG01 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trav13n-4A0A0G2JG01 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav13n-4A0A0G2JG01 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.1■□□□□ 0.33
Trav13n-4A0A0G2JG01 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav13n-4A0A0G2JG01 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav13n-4A0A0G2JG01 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trav13n-4A0A0G2JG01 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav13n-4A0A0G2JG01 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav13n-4A0A0G2JG01 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav13n-4A0A0G2JG01 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav13n-4A0A0G2JG01 Gm43566-201ENSMUST00000196851 808 ntBASIC17.09■□□□□ 0.33
Trav13n-4A0A0G2JG01 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.09■□□□□ 0.33
Trav13n-4A0A0G2JG01 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.09■□□□□ 0.33
Trav13n-4A0A0G2JG01 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav13n-4A0A0G2JG01 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav13n-4A0A0G2JG01 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav13n-4A0A0G2JG01 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.09■□□□□ 0.33
Trav13n-4A0A0G2JG01 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav13n-4A0A0G2JG01 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Trav13n-4A0A0G2JG01 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Trav13n-4A0A0G2JG01 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.08■□□□□ 0.33
Trav13n-4A0A0G2JG01 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav13n-4A0A0G2JG01 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav13n-4A0A0G2JG01 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Trav13n-4A0A0G2JG01 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav13n-4A0A0G2JG01 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.08■□□□□ 0.32
Trav13n-4A0A0G2JG01 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.08■□□□□ 0.32
Trav13n-4A0A0G2JG01 Gm45444-201ENSMUST00000211394 898 ntBASIC17.08■□□□□ 0.32
Trav13n-4A0A0G2JG01 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav13n-4A0A0G2JG01 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav13n-4A0A0G2JG01 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Trav13n-4A0A0G2JG01 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trav13n-4A0A0G2JG01 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav13n-4A0A0G2JG01 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav13n-4A0A0G2JG01 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav13n-4A0A0G2JG01 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.07■□□□□ 0.32
Trav13n-4A0A0G2JG01 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav13n-4A0A0G2JG01 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav13n-4A0A0G2JG01 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav13n-4A0A0G2JG01 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Trav13n-4A0A0G2JG01 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav13n-4A0A0G2JG01 Gm13238-201ENSMUST00000117655 780 ntBASIC17.06■□□□□ 0.32
Trav13n-4A0A0G2JG01 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.06■□□□□ 0.32
Trav13n-4A0A0G2JG01 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav13n-4A0A0G2JG01 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav13n-4A0A0G2JG01 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.06■□□□□ 0.32
Trav13n-4A0A0G2JG01 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Trav13n-4A0A0G2JG01 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav13n-4A0A0G2JG01 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav13n-4A0A0G2JG01 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav13n-4A0A0G2JG01 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav13n-4A0A0G2JG01 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav13n-4A0A0G2JG01 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav13n-4A0A0G2JG01 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav13n-4A0A0G2JG01 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav13n-4A0A0G2JG01 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trav13n-4A0A0G2JG01 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav13n-4A0A0G2JG01 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.05■□□□□ 0.32
Trav13n-4A0A0G2JG01 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav13n-4A0A0G2JG01 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms