Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav9n-2A0A0G2JDP3 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC15.46■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC15.46■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav9n-2A0A0G2JDP3 AC153962.1-201ENSMUST00000218530 1948 ntBASIC15.45■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC15.45■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC15.45■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC15.44■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Gm10420-201ENSMUST00000121713 882 ntBASIC15.42■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav9n-2A0A0G2JDP3 Dmtn-209ENSMUST00000228295 2572 ntBASIC15.39■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC15.39■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav9n-2A0A0G2JDP3 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC15.39■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC15.38■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC15.38■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav9n-2A0A0G2JDP3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Cap2-205ENSMUST00000225824 1634 ntBASIC15.38■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9n-2A0A0G2JDP3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC15.37■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms