Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.09■□□□□ 0.33
Trbv19A0A0B4J1H4 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.09■□□□□ 0.33
Trbv19A0A0B4J1H4 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Trbv19A0A0B4J1H4 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trbv19A0A0B4J1H4 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trbv19A0A0B4J1H4 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trbv19A0A0B4J1H4 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trbv19A0A0B4J1H4 Gm27502-201ENSMUST00000183495 199 ntBASIC17.08■□□□□ 0.32
Trbv19A0A0B4J1H4 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.08■□□□□ 0.32
Trbv19A0A0B4J1H4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Trbv19A0A0B4J1H4 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trbv19A0A0B4J1H4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trbv19A0A0B4J1H4 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Trbv19A0A0B4J1H4 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trbv19A0A0B4J1H4 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.07■□□□□ 0.32
Trbv19A0A0B4J1H4 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv19A0A0B4J1H4 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv19A0A0B4J1H4 Gm11175-201ENSMUST00000116172 543 ntBASIC17.07■□□□□ 0.32
Trbv19A0A0B4J1H4 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv19A0A0B4J1H4 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv19A0A0B4J1H4 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.07■□□□□ 0.32
Trbv19A0A0B4J1H4 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv19A0A0B4J1H4 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv19A0A0B4J1H4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.06■□□□□ 0.32
Trbv19A0A0B4J1H4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv19A0A0B4J1H4 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv19A0A0B4J1H4 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv19A0A0B4J1H4 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv19A0A0B4J1H4 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv19A0A0B4J1H4 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv19A0A0B4J1H4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.06■□□□□ 0.32
Trbv19A0A0B4J1H4 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
Trbv19A0A0B4J1H4 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv19A0A0B4J1H4 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv19A0A0B4J1H4 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv19A0A0B4J1H4 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trbv19A0A0B4J1H4 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.05■□□□□ 0.32
Trbv19A0A0B4J1H4 Gm14523-201ENSMUST00000117260 558 ntBASIC17.05■□□□□ 0.32
Trbv19A0A0B4J1H4 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv19A0A0B4J1H4 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv19A0A0B4J1H4 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.05■□□□□ 0.32
Trbv19A0A0B4J1H4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv19A0A0B4J1H4 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Trbv19A0A0B4J1H4 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv19A0A0B4J1H4 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.05■□□□□ 0.32
Trbv19A0A0B4J1H4 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trbv19A0A0B4J1H4 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv19A0A0B4J1H4 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv19A0A0B4J1H4 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trbv19A0A0B4J1H4 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv19A0A0B4J1H4 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv19A0A0B4J1H4 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Trbv19A0A0B4J1H4 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.04■□□□□ 0.32
Trbv19A0A0B4J1H4 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17.04■□□□□ 0.32
Trbv19A0A0B4J1H4 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.04■□□□□ 0.32
Trbv19A0A0B4J1H4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv19A0A0B4J1H4 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv19A0A0B4J1H4 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv19A0A0B4J1H4 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv19A0A0B4J1H4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trbv19A0A0B4J1H4 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv19A0A0B4J1H4 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv19A0A0B4J1H4 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv19A0A0B4J1H4 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trbv19A0A0B4J1H4 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trbv19A0A0B4J1H4 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trbv19A0A0B4J1H4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.02■□□□□ 0.32
Trbv19A0A0B4J1H4 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trbv19A0A0B4J1H4 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.02■□□□□ 0.31
Trbv19A0A0B4J1H4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv19A0A0B4J1H4 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv19A0A0B4J1H4 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.01■□□□□ 0.31
Trbv19A0A0B4J1H4 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trbv19A0A0B4J1H4 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv19A0A0B4J1H4 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv19A0A0B4J1H4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trbv19A0A0B4J1H4 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv19A0A0B4J1H4 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv19A0A0B4J1H4 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv19A0A0B4J1H4 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv19A0A0B4J1H4 Gm7332-201ENSMUST00000118351 454 ntBASIC17■□□□□ 0.31
Trbv19A0A0B4J1H4 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv19A0A0B4J1H4 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trbv19A0A0B4J1H4 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trbv19A0A0B4J1H4 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv19A0A0B4J1H4 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trbv19A0A0B4J1H4 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv19A0A0B4J1H4 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv19A0A0B4J1H4 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.99■□□□□ 0.31
Trbv19A0A0B4J1H4 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC16.99■□□□□ 0.31
Trbv19A0A0B4J1H4 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv19A0A0B4J1H4 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv19A0A0B4J1H4 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv19A0A0B4J1H4 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Trbv19A0A0B4J1H4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Trbv19A0A0B4J1H4 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv19A0A0B4J1H4 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC16.98■□□□□ 0.31
Trbv19A0A0B4J1H4 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv19A0A0B4J1H4 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv19A0A0B4J1H4 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms