Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Gm27502-201ENSMUST00000183495 199 ntBASIC17.56■□□□□ 0.4
Ighv1-47A0A0A6YY41 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv1-47A0A0A6YY41 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Ighv1-47A0A0A6YY41 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv1-47A0A0A6YY41 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv1-47A0A0A6YY41 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ighv1-47A0A0A6YY41 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.55■□□□□ 0.4
Ighv1-47A0A0A6YY41 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ighv1-47A0A0A6YY41 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ighv1-47A0A0A6YY41 Gm14523-201ENSMUST00000117260 558 ntBASIC17.55■□□□□ 0.4
Ighv1-47A0A0A6YY41 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ighv1-47A0A0A6YY41 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ighv1-47A0A0A6YY41 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv1-47A0A0A6YY41 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv1-47A0A0A6YY41 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv1-47A0A0A6YY41 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv1-47A0A0A6YY41 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv1-47A0A0A6YY41 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ighv1-47A0A0A6YY41 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ighv1-47A0A0A6YY41 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv1-47A0A0A6YY41 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ighv1-47A0A0A6YY41 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ighv1-47A0A0A6YY41 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.53■□□□□ 0.4
Ighv1-47A0A0A6YY41 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ighv1-47A0A0A6YY41 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ighv1-47A0A0A6YY41 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ighv1-47A0A0A6YY41 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ighv1-47A0A0A6YY41 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ighv1-47A0A0A6YY41 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ighv1-47A0A0A6YY41 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ighv1-47A0A0A6YY41 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ighv1-47A0A0A6YY41 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ighv1-47A0A0A6YY41 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ighv1-47A0A0A6YY41 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.52■□□□□ 0.4
Ighv1-47A0A0A6YY41 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.52■□□□□ 0.4
Ighv1-47A0A0A6YY41 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ighv1-47A0A0A6YY41 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ighv1-47A0A0A6YY41 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ighv1-47A0A0A6YY41 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ighv1-47A0A0A6YY41 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ighv1-47A0A0A6YY41 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ighv1-47A0A0A6YY41 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.51■□□□□ 0.39
Ighv1-47A0A0A6YY41 Gm7332-201ENSMUST00000118351 454 ntBASIC17.51■□□□□ 0.39
Ighv1-47A0A0A6YY41 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ighv1-47A0A0A6YY41 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.51■□□□□ 0.39
Ighv1-47A0A0A6YY41 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.51■□□□□ 0.39
Ighv1-47A0A0A6YY41 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.51■□□□□ 0.39
Ighv1-47A0A0A6YY41 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.51■□□□□ 0.39
Ighv1-47A0A0A6YY41 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ighv1-47A0A0A6YY41 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.51■□□□□ 0.39
Ighv1-47A0A0A6YY41 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ighv1-47A0A0A6YY41 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.51■□□□□ 0.39
Ighv1-47A0A0A6YY41 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ighv1-47A0A0A6YY41 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv1-47A0A0A6YY41 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Ighv1-47A0A0A6YY41 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv1-47A0A0A6YY41 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv1-47A0A0A6YY41 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Ighv1-47A0A0A6YY41 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-47A0A0A6YY41 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-47A0A0A6YY41 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Ighv1-47A0A0A6YY41 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-47A0A0A6YY41 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-47A0A0A6YY41 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-47A0A0A6YY41 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-47A0A0A6YY41 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-47A0A0A6YY41 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-47A0A0A6YY41 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.48■□□□□ 0.39
Ighv1-47A0A0A6YY41 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.48■□□□□ 0.39
Ighv1-47A0A0A6YY41 Gm12366-201ENSMUST00000121722 873 ntBASIC17.48■□□□□ 0.39
Ighv1-47A0A0A6YY41 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.48■□□□□ 0.39
Ighv1-47A0A0A6YY41 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.48■□□□□ 0.39
Ighv1-47A0A0A6YY41 Gm5786-201ENSMUST00000085368 882 ntBASIC17.48■□□□□ 0.39
Ighv1-47A0A0A6YY41 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-47A0A0A6YY41 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-47A0A0A6YY41 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-47A0A0A6YY41 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.48■□□□□ 0.39
Ighv1-47A0A0A6YY41 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-47A0A0A6YY41 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-47A0A0A6YY41 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-47A0A0A6YY41 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-47A0A0A6YY41 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ighv1-47A0A0A6YY41 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-47A0A0A6YY41 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-47A0A0A6YY41 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-47A0A0A6YY41 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ighv1-47A0A0A6YY41 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-47A0A0A6YY41 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.47■□□□□ 0.39
Ighv1-47A0A0A6YY41 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-47A0A0A6YY41 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-47A0A0A6YY41 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.47■□□□□ 0.39
Ighv1-47A0A0A6YY41 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv1-47A0A0A6YY41 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ighv1-47A0A0A6YY41 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv1-47A0A0A6YY41 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv1-47A0A0A6YY41 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv1-47A0A0A6YY41 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv1-47A0A0A6YY41 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv1-47A0A0A6YY41 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv1-47A0A0A6YY41 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms