Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav21-dv12A0A075B6C4 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trav21-dv12A0A075B6C4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav21-dv12A0A075B6C4 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav21-dv12A0A075B6C4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav21-dv12A0A075B6C4 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav21-dv12A0A075B6C4 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav21-dv12A0A075B6C4 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC16.33■□□□□ 0.2
Trav21-dv12A0A075B6C4 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav21-dv12A0A075B6C4 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav21-dv12A0A075B6C4 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav21-dv12A0A075B6C4 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav21-dv12A0A075B6C4 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav21-dv12A0A075B6C4 Gm11175-201ENSMUST00000116172 543 ntBASIC16.32■□□□□ 0.2
Trav21-dv12A0A075B6C4 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC16.32■□□□□ 0.2
Trav21-dv12A0A075B6C4 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav21-dv12A0A075B6C4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav21-dv12A0A075B6C4 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Trav21-dv12A0A075B6C4 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav21-dv12A0A075B6C4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav21-dv12A0A075B6C4 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav21-dv12A0A075B6C4 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav21-dv12A0A075B6C4 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav21-dv12A0A075B6C4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trav21-dv12A0A075B6C4 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav21-dv12A0A075B6C4 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav21-dv12A0A075B6C4 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav21-dv12A0A075B6C4 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.3■□□□□ 0.2
Trav21-dv12A0A075B6C4 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav21-dv12A0A075B6C4 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav21-dv12A0A075B6C4 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav21-dv12A0A075B6C4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Trav21-dv12A0A075B6C4 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trav21-dv12A0A075B6C4 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav21-dv12A0A075B6C4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav21-dv12A0A075B6C4 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav21-dv12A0A075B6C4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav21-dv12A0A075B6C4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC16.3■□□□□ 0.2
Trav21-dv12A0A075B6C4 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trav21-dv12A0A075B6C4 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav21-dv12A0A075B6C4 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.29■□□□□ 0.2
Trav21-dv12A0A075B6C4 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
Trav21-dv12A0A075B6C4 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC16.29■□□□□ 0.2
Trav21-dv12A0A075B6C4 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Trav21-dv12A0A075B6C4 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav21-dv12A0A075B6C4 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav21-dv12A0A075B6C4 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16.29■□□□□ 0.2
Trav21-dv12A0A075B6C4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav21-dv12A0A075B6C4 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav21-dv12A0A075B6C4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.29■□□□□ 0.2
Trav21-dv12A0A075B6C4 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav21-dv12A0A075B6C4 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav21-dv12A0A075B6C4 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav21-dv12A0A075B6C4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav21-dv12A0A075B6C4 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav21-dv12A0A075B6C4 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav21-dv12A0A075B6C4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Trav21-dv12A0A075B6C4 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav21-dv12A0A075B6C4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav21-dv12A0A075B6C4 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav21-dv12A0A075B6C4 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC16.27■□□□□ 0.2
Trav21-dv12A0A075B6C4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav21-dv12A0A075B6C4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC16.27■□□□□ 0.2
Trav21-dv12A0A075B6C4 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav21-dv12A0A075B6C4 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.27■□□□□ 0.2
Trav21-dv12A0A075B6C4 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Trav21-dv12A0A075B6C4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav21-dv12A0A075B6C4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Trav21-dv12A0A075B6C4 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav21-dv12A0A075B6C4 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trav21-dv12A0A075B6C4 Gm32051-202ENSMUST00000197905 2385 ntBASIC16.26■□□□□ 0.19
Trav21-dv12A0A075B6C4 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav21-dv12A0A075B6C4 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC16.26■□□□□ 0.19
Trav21-dv12A0A075B6C4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav21-dv12A0A075B6C4 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav21-dv12A0A075B6C4 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.26■□□□□ 0.19
Trav21-dv12A0A075B6C4 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav21-dv12A0A075B6C4 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trav21-dv12A0A075B6C4 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav21-dv12A0A075B6C4 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Trav21-dv12A0A075B6C4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav21-dv12A0A075B6C4 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav21-dv12A0A075B6C4 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav21-dv12A0A075B6C4 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav21-dv12A0A075B6C4 Gm14523-201ENSMUST00000117260 558 ntBASIC16.25■□□□□ 0.19
Trav21-dv12A0A075B6C4 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav21-dv12A0A075B6C4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC16.25■□□□□ 0.19
Trav21-dv12A0A075B6C4 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav21-dv12A0A075B6C4 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav21-dv12A0A075B6C4 Gm13042-201ENSMUST00000119244 1955 ntBASIC16.25■□□□□ 0.19
Trav21-dv12A0A075B6C4 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav21-dv12A0A075B6C4 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav21-dv12A0A075B6C4 Gm7332-201ENSMUST00000118351 454 ntBASIC16.24■□□□□ 0.19
Trav21-dv12A0A075B6C4 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trav21-dv12A0A075B6C4 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav21-dv12A0A075B6C4 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav21-dv12A0A075B6C4 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav21-dv12A0A075B6C4 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav21-dv12A0A075B6C4 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav21-dv12A0A075B6C4 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms