Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.13□□□□□ -0.79
PdfS4R2K0 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
PdfS4R2K0 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
PdfS4R2K0 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.13□□□□□ -0.79
PdfS4R2K0 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
PdfS4R2K0 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
PdfS4R2K0 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
PdfS4R2K0 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
PdfS4R2K0 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
PdfS4R2K0 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
PdfS4R2K0 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
PdfS4R2K0 Gm13517-201ENSMUST00000120782 1495 ntBASIC10.13□□□□□ -0.79
PdfS4R2K0 Gm13730-201ENSMUST00000121036 1462 ntBASIC10.13□□□□□ -0.79
PdfS4R2K0 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
PdfS4R2K0 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
PdfS4R2K0 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
PdfS4R2K0 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC10.13□□□□□ -0.79
PdfS4R2K0 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC10.13□□□□□ -0.79
PdfS4R2K0 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC10.13□□□□□ -0.79
PdfS4R2K0 Gm15483-201ENSMUST00000120338 456 ntBASIC10.13□□□□□ -0.79
PdfS4R2K0 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC10.13□□□□□ -0.79
PdfS4R2K0 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
PdfS4R2K0 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC10.13□□□□□ -0.79
PdfS4R2K0 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC10.13□□□□□ -0.79
PdfS4R2K0 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
PdfS4R2K0 Gm25144-201ENSMUST00000179561 110 ntBASIC10.13□□□□□ -0.79
PdfS4R2K0 Gm25352-201ENSMUST00000179815 110 ntBASIC10.13□□□□□ -0.79
PdfS4R2K0 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC10.13□□□□□ -0.79
PdfS4R2K0 Gm10576-201ENSMUST00000191927 825 ntBASIC10.13□□□□□ -0.79
PdfS4R2K0 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
PdfS4R2K0 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
PdfS4R2K0 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
PdfS4R2K0 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
PdfS4R2K0 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
PdfS4R2K0 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
PdfS4R2K0 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
PdfS4R2K0 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC10.13□□□□□ -0.79
PdfS4R2K0 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC10.13□□□□□ -0.79
PdfS4R2K0 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
PdfS4R2K0 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
PdfS4R2K0 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
PdfS4R2K0 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
PdfS4R2K0 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
PdfS4R2K0 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
PdfS4R2K0 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
PdfS4R2K0 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.12□□□□□ -0.79
PdfS4R2K0 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PdfS4R2K0 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
PdfS4R2K0 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC10.12□□□□□ -0.79
PdfS4R2K0 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PdfS4R2K0 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.12□□□□□ -0.79
PdfS4R2K0 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
PdfS4R2K0 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PdfS4R2K0 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PdfS4R2K0 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PdfS4R2K0 Gm42466-201ENSMUST00000202099 1301 ntBASIC10.12□□□□□ -0.79
PdfS4R2K0 Matn2-203ENSMUST00000226766 3252 ntBASIC10.12□□□□□ -0.79
PdfS4R2K0 Gm45011-201ENSMUST00000207620 2297 ntBASIC10.12□□□□□ -0.79
PdfS4R2K0 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PdfS4R2K0 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
PdfS4R2K0 Gm7336-201ENSMUST00000107041 1232 ntBASIC10.12□□□□□ -0.79
PdfS4R2K0 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC10.12□□□□□ -0.79
PdfS4R2K0 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC10.12□□□□□ -0.79
PdfS4R2K0 Gm15957-201ENSMUST00000118893 974 ntBASIC10.12□□□□□ -0.79
PdfS4R2K0 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC10.12□□□□□ -0.79
PdfS4R2K0 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
PdfS4R2K0 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
PdfS4R2K0 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PdfS4R2K0 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PdfS4R2K0 Gm22175-201ENSMUST00000175007 78 ntBASIC10.12□□□□□ -0.79
PdfS4R2K0 Gm3809-201ENSMUST00000180973 1006 ntBASIC10.12□□□□□ -0.79
PdfS4R2K0 Gm8116-201ENSMUST00000182917 1201 ntBASIC10.12□□□□□ -0.79
PdfS4R2K0 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
PdfS4R2K0 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC10.12□□□□□ -0.79
PdfS4R2K0 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC10.12□□□□□ -0.79
PdfS4R2K0 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PdfS4R2K0 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PdfS4R2K0 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PdfS4R2K0 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PdfS4R2K0 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
PdfS4R2K0 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
PdfS4R2K0 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
PdfS4R2K0 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC10.12□□□□□ -0.79
PdfS4R2K0 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PdfS4R2K0 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
PdfS4R2K0 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PdfS4R2K0 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PdfS4R2K0 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PdfS4R2K0 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.12□□□□□ -0.79
PdfS4R2K0 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PdfS4R2K0 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.12□□□□□ -0.79
PdfS4R2K0 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.12□□□□□ -0.79
PdfS4R2K0 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
PdfS4R2K0 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
PdfS4R2K0 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC10.12□□□□□ -0.79
PdfS4R2K0 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
PdfS4R2K0 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
PdfS4R2K0 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PdfS4R2K0 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC10.12□□□□□ -0.79
PdfS4R2K0 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms