Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb2S4R1M3 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb2S4R1M3 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
H2afb2S4R1M3 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.21□□□□□ -0.29
H2afb2S4R1M3 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb2S4R1M3 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb2S4R1M3 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb2S4R1M3 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb2S4R1M3 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.21□□□□□ -0.3
H2afb2S4R1M3 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
H2afb2S4R1M3 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
H2afb2S4R1M3 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
H2afb2S4R1M3 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
H2afb2S4R1M3 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
H2afb2S4R1M3 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
H2afb2S4R1M3 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
H2afb2S4R1M3 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
H2afb2S4R1M3 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
H2afb2S4R1M3 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.2□□□□□ -0.3
H2afb2S4R1M3 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
H2afb2S4R1M3 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb2S4R1M3 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.19□□□□□ -0.3
H2afb2S4R1M3 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb2S4R1M3 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb2S4R1M3 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb2S4R1M3 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb2S4R1M3 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb2S4R1M3 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb2S4R1M3 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.19□□□□□ -0.3
H2afb2S4R1M3 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb2S4R1M3 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb2S4R1M3 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb2S4R1M3 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
H2afb2S4R1M3 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb2S4R1M3 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb2S4R1M3 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.19□□□□□ -0.3
H2afb2S4R1M3 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb2S4R1M3 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.19□□□□□ -0.3
H2afb2S4R1M3 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
H2afb2S4R1M3 Gm18018-201ENSMUST00000198273 408 ntBASIC13.19□□□□□ -0.3
H2afb2S4R1M3 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb2S4R1M3 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb2S4R1M3 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb2S4R1M3 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb2S4R1M3 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
H2afb2S4R1M3 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.19□□□□□ -0.3
H2afb2S4R1M3 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
H2afb2S4R1M3 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb2S4R1M3 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb2S4R1M3 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb2S4R1M3 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb2S4R1M3 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
H2afb2S4R1M3 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb2S4R1M3 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb2S4R1M3 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
H2afb2S4R1M3 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb2S4R1M3 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.18□□□□□ -0.3
H2afb2S4R1M3 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb2S4R1M3 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb2S4R1M3 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb2S4R1M3 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms