Protein–RNA interactions for Protein: Q9Z260

Cldn8, Claudin-8, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn8Q9Z260 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.53□□□□□ -0.4
Cldn8Q9Z260 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn8Q9Z260 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Cldn8Q9Z260 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.53□□□□□ -0.4
Cldn8Q9Z260 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Cldn8Q9Z260 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.53□□□□□ -0.4
Cldn8Q9Z260 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn8Q9Z260 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.53□□□□□ -0.4
Cldn8Q9Z260 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn8Q9Z260 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn8Q9Z260 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn8Q9Z260 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn8Q9Z260 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.53□□□□□ -0.4
Cldn8Q9Z260 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn8Q9Z260 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn8Q9Z260 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn8Q9Z260 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.53□□□□□ -0.4
Cldn8Q9Z260 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn8Q9Z260 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cldn8Q9Z260 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn8Q9Z260 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn8Q9Z260 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn8Q9Z260 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn8Q9Z260 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn8Q9Z260 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn8Q9Z260 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cldn8Q9Z260 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn8Q9Z260 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn8Q9Z260 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn8Q9Z260 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn8Q9Z260 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn8Q9Z260 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn8Q9Z260 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn8Q9Z260 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn8Q9Z260 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Cldn8Q9Z260 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn8Q9Z260 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Cldn8Q9Z260 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.52□□□□□ -0.4
Cldn8Q9Z260 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn8Q9Z260 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
Cldn8Q9Z260 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn8Q9Z260 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.52□□□□□ -0.41
Cldn8Q9Z260 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Cldn8Q9Z260 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn8Q9Z260 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Cldn8Q9Z260 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.52□□□□□ -0.41
Cldn8Q9Z260 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn8Q9Z260 Gm13689-201ENSMUST00000119360 685 ntBASIC12.52□□□□□ -0.41
Cldn8Q9Z260 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.52□□□□□ -0.41
Cldn8Q9Z260 Mir7023-201ENSMUST00000185093 64 ntBASIC12.52□□□□□ -0.41
Cldn8Q9Z260 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn8Q9Z260 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.52□□□□□ -0.41
Cldn8Q9Z260 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn8Q9Z260 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.52□□□□□ -0.41
Cldn8Q9Z260 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.52□□□□□ -0.41
Cldn8Q9Z260 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.52□□□□□ -0.41
Cldn8Q9Z260 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn8Q9Z260 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Cldn8Q9Z260 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn8Q9Z260 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn8Q9Z260 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn8Q9Z260 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn8Q9Z260 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn8Q9Z260 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn8Q9Z260 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.52□□□□□ -0.41
Cldn8Q9Z260 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.52□□□□□ -0.41
Cldn8Q9Z260 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.52□□□□□ -0.41
Cldn8Q9Z260 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn8Q9Z260 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.52□□□□□ -0.41
Cldn8Q9Z260 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn8Q9Z260 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.52□□□□□ -0.41
Cldn8Q9Z260 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn8Q9Z260 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn8Q9Z260 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn8Q9Z260 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn8Q9Z260 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn8Q9Z260 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn8Q9Z260 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn8Q9Z260 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn8Q9Z260 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn8Q9Z260 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn8Q9Z260 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.51□□□□□ -0.41
Cldn8Q9Z260 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn8Q9Z260 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn8Q9Z260 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.51□□□□□ -0.41
Cldn8Q9Z260 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cldn8Q9Z260 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn8Q9Z260 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn8Q9Z260 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn8Q9Z260 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn8Q9Z260 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn8Q9Z260 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cldn8Q9Z260 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn8Q9Z260 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.51□□□□□ -0.41
Cldn8Q9Z260 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.51□□□□□ -0.41
Cldn8Q9Z260 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.51□□□□□ -0.41
Cldn8Q9Z260 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.51□□□□□ -0.41
Cldn8Q9Z260 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.51□□□□□ -0.41
Cldn8Q9Z260 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn8Q9Z260 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms