Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn9Q9Z0S7 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn9Q9Z0S7 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn9Q9Z0S7 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn9Q9Z0S7 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn9Q9Z0S7 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cldn9Q9Z0S7 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn9Q9Z0S7 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn9Q9Z0S7 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn9Q9Z0S7 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn9Q9Z0S7 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cldn9Q9Z0S7 Gm6447-201ENSMUST00000118905 835 ntBASIC12.7□□□□□ -0.38
Cldn9Q9Z0S7 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cldn9Q9Z0S7 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.7□□□□□ -0.38
Cldn9Q9Z0S7 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn9Q9Z0S7 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn9Q9Z0S7 Gm44397-201ENSMUST00000195950 113 ntBASIC12.7□□□□□ -0.38
Cldn9Q9Z0S7 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.7□□□□□ -0.38
Cldn9Q9Z0S7 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.7□□□□□ -0.38
Cldn9Q9Z0S7 Gm18624-201ENSMUST00000220966 658 ntBASIC12.7□□□□□ -0.38
Cldn9Q9Z0S7 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.7□□□□□ -0.38
Cldn9Q9Z0S7 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn9Q9Z0S7 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn9Q9Z0S7 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn9Q9Z0S7 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn9Q9Z0S7 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn9Q9Z0S7 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.7□□□□□ -0.38
Cldn9Q9Z0S7 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.7□□□□□ -0.38
Cldn9Q9Z0S7 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn9Q9Z0S7 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn9Q9Z0S7 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cldn9Q9Z0S7 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn9Q9Z0S7 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Cldn9Q9Z0S7 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn9Q9Z0S7 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn9Q9Z0S7 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.68□□□□□ -0.38
Cldn9Q9Z0S7 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Cldn9Q9Z0S7 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn9Q9Z0S7 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Cldn9Q9Z0S7 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.68□□□□□ -0.38
Cldn9Q9Z0S7 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn9Q9Z0S7 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn9Q9Z0S7 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn9Q9Z0S7 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Cldn9Q9Z0S7 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn9Q9Z0S7 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cldn9Q9Z0S7 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.68□□□□□ -0.38
Cldn9Q9Z0S7 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Cldn9Q9Z0S7 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn9Q9Z0S7 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.68□□□□□ -0.38
Cldn9Q9Z0S7 Gm5866-201ENSMUST00000177881 973 ntBASIC12.68□□□□□ -0.38
Cldn9Q9Z0S7 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.68□□□□□ -0.38
Cldn9Q9Z0S7 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.68□□□□□ -0.38
Cldn9Q9Z0S7 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.68□□□□□ -0.38
Cldn9Q9Z0S7 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Cldn9Q9Z0S7 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn9Q9Z0S7 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn9Q9Z0S7 Gm15823-201ENSMUST00000064305 670 ntBASIC12.68□□□□□ -0.38
Cldn9Q9Z0S7 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn9Q9Z0S7 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.68□□□□□ -0.38
Cldn9Q9Z0S7 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms