Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Gm12403-201ENSMUST00000121384 959 ntBASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Gm12091-201ENSMUST00000146791 830 ntBASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf40aQ9R1C7 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40aQ9R1C7 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40aQ9R1C7 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40aQ9R1C7 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40aQ9R1C7 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40aQ9R1C7 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40aQ9R1C7 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40aQ9R1C7 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40aQ9R1C7 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40aQ9R1C7 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Prpf40aQ9R1C7 Gm14928-201ENSMUST00000120198 477 ntBASIC14.54□□□□□ -0.08
Prpf40aQ9R1C7 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.54□□□□□ -0.08
Prpf40aQ9R1C7 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Prpf40aQ9R1C7 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.54□□□□□ -0.08
Prpf40aQ9R1C7 Gm27701-201ENSMUST00000184498 110 ntBASIC14.54□□□□□ -0.08
Prpf40aQ9R1C7 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40aQ9R1C7 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40aQ9R1C7 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Prpf40aQ9R1C7 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40aQ9R1C7 Gm6180-201ENSMUST00000065243 498 ntBASIC14.54□□□□□ -0.08
Prpf40aQ9R1C7 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40aQ9R1C7 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40aQ9R1C7 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40aQ9R1C7 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Prpf40aQ9R1C7 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.54□□□□□ -0.08
Prpf40aQ9R1C7 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40aQ9R1C7 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40aQ9R1C7 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40aQ9R1C7 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40aQ9R1C7 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Prpf40aQ9R1C7 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf40aQ9R1C7 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf40aQ9R1C7 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf40aQ9R1C7 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf40aQ9R1C7 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Prpf40aQ9R1C7 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf40aQ9R1C7 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf40aQ9R1C7 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf40aQ9R1C7 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf40aQ9R1C7 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.53□□□□□ -0.08
Prpf40aQ9R1C7 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf40aQ9R1C7 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf40aQ9R1C7 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
Prpf40aQ9R1C7 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf40aQ9R1C7 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf40aQ9R1C7 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Prpf40aQ9R1C7 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf40aQ9R1C7 Gm7063-201ENSMUST00000186840 981 ntBASIC14.53□□□□□ -0.08
Prpf40aQ9R1C7 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.53□□□□□ -0.08
Prpf40aQ9R1C7 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.53□□□□□ -0.08
Prpf40aQ9R1C7 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf40aQ9R1C7 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf40aQ9R1C7 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Prpf40aQ9R1C7 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf40aQ9R1C7 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf40aQ9R1C7 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf40aQ9R1C7 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.53□□□□□ -0.08
Prpf40aQ9R1C7 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf40aQ9R1C7 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Prpf40aQ9R1C7 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms