Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AmfrQ9R049 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.78□□□□□ -0.04
AmfrQ9R049 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AmfrQ9R049 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AmfrQ9R049 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AmfrQ9R049 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AmfrQ9R049 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.78□□□□□ -0.04
AmfrQ9R049 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
AmfrQ9R049 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AmfrQ9R049 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AmfrQ9R049 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
AmfrQ9R049 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AmfrQ9R049 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AmfrQ9R049 Gm12485-201ENSMUST00000119641 291 ntBASIC14.78□□□□□ -0.04
AmfrQ9R049 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AmfrQ9R049 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
AmfrQ9R049 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.78□□□□□ -0.04
AmfrQ9R049 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AmfrQ9R049 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AmfrQ9R049 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
AmfrQ9R049 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
AmfrQ9R049 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
AmfrQ9R049 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AmfrQ9R049 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AmfrQ9R049 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
AmfrQ9R049 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.78□□□□□ -0.04
AmfrQ9R049 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
AmfrQ9R049 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
AmfrQ9R049 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
AmfrQ9R049 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.77□□□□□ -0.04
AmfrQ9R049 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
AmfrQ9R049 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
AmfrQ9R049 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
AmfrQ9R049 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
AmfrQ9R049 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
AmfrQ9R049 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.04
AmfrQ9R049 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
AmfrQ9R049 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
AmfrQ9R049 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
AmfrQ9R049 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.77□□□□□ -0.05
AmfrQ9R049 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.77□□□□□ -0.05
AmfrQ9R049 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
AmfrQ9R049 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.77□□□□□ -0.05
AmfrQ9R049 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.77□□□□□ -0.05
AmfrQ9R049 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.77□□□□□ -0.05
AmfrQ9R049 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.77□□□□□ -0.05
AmfrQ9R049 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.77□□□□□ -0.05
AmfrQ9R049 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.77□□□□□ -0.05
AmfrQ9R049 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AmfrQ9R049 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
AmfrQ9R049 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
AmfrQ9R049 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
AmfrQ9R049 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AmfrQ9R049 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
AmfrQ9R049 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
AmfrQ9R049 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
AmfrQ9R049 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
AmfrQ9R049 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
AmfrQ9R049 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AmfrQ9R049 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
AmfrQ9R049 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
AmfrQ9R049 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
AmfrQ9R049 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AmfrQ9R049 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.76□□□□□ -0.05
AmfrQ9R049 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.76□□□□□ -0.05
AmfrQ9R049 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
AmfrQ9R049 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
AmfrQ9R049 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
AmfrQ9R049 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
AmfrQ9R049 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
AmfrQ9R049 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AmfrQ9R049 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AmfrQ9R049 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AmfrQ9R049 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
AmfrQ9R049 Gm13689-201ENSMUST00000119360 685 ntBASIC14.76□□□□□ -0.05
AmfrQ9R049 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.76□□□□□ -0.05
AmfrQ9R049 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AmfrQ9R049 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AmfrQ9R049 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.76□□□□□ -0.05
AmfrQ9R049 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.76□□□□□ -0.05
AmfrQ9R049 Gm8463-201ENSMUST00000208573 613 ntBASIC14.76□□□□□ -0.05
AmfrQ9R049 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.76□□□□□ -0.05
AmfrQ9R049 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
AmfrQ9R049 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AmfrQ9R049 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AmfrQ9R049 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.76□□□□□ -0.05
AmfrQ9R049 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AmfrQ9R049 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AmfrQ9R049 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.76□□□□□ -0.05
AmfrQ9R049 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
AmfrQ9R049 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
AmfrQ9R049 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.76□□□□□ -0.05
AmfrQ9R049 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.76□□□□□ -0.05
AmfrQ9R049 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
AmfrQ9R049 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
AmfrQ9R049 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
AmfrQ9R049 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
AmfrQ9R049 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.75□□□□□ -0.05
AmfrQ9R049 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AmfrQ9R049 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms