Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chaf1aQ9QWF0 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chaf1aQ9QWF0 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chaf1aQ9QWF0 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.81□□□□□ -0.04
Chaf1aQ9QWF0 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Chaf1aQ9QWF0 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Chaf1aQ9QWF0 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chaf1aQ9QWF0 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chaf1aQ9QWF0 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chaf1aQ9QWF0 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.81□□□□□ -0.04
Chaf1aQ9QWF0 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chaf1aQ9QWF0 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.81□□□□□ -0.04
Chaf1aQ9QWF0 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.81□□□□□ -0.04
Chaf1aQ9QWF0 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Chaf1aQ9QWF0 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.81□□□□□ -0.04
Chaf1aQ9QWF0 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chaf1aQ9QWF0 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.81□□□□□ -0.04
Chaf1aQ9QWF0 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chaf1aQ9QWF0 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chaf1aQ9QWF0 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chaf1aQ9QWF0 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chaf1aQ9QWF0 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Chaf1aQ9QWF0 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.81□□□□□ -0.04
Chaf1aQ9QWF0 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chaf1aQ9QWF0 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.81□□□□□ -0.04
Chaf1aQ9QWF0 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.81□□□□□ -0.04
Chaf1aQ9QWF0 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.81□□□□□ -0.04
Chaf1aQ9QWF0 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chaf1aQ9QWF0 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chaf1aQ9QWF0 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chaf1aQ9QWF0 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chaf1aQ9QWF0 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chaf1aQ9QWF0 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chaf1aQ9QWF0 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chaf1aQ9QWF0 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Chaf1aQ9QWF0 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Chaf1aQ9QWF0 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.8□□□□□ -0.04
Chaf1aQ9QWF0 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chaf1aQ9QWF0 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chaf1aQ9QWF0 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.8□□□□□ -0.04
Chaf1aQ9QWF0 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chaf1aQ9QWF0 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Chaf1aQ9QWF0 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chaf1aQ9QWF0 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.8□□□□□ -0.04
Chaf1aQ9QWF0 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chaf1aQ9QWF0 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chaf1aQ9QWF0 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chaf1aQ9QWF0 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chaf1aQ9QWF0 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chaf1aQ9QWF0 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chaf1aQ9QWF0 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chaf1aQ9QWF0 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chaf1aQ9QWF0 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chaf1aQ9QWF0 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Gm9522-201ENSMUST00000182394 926 ntBASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Gm17795-201ENSMUST00000214505 757 ntBASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms