Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Prg4Q9JM99 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.02□□□□□ -0.48
Prg4Q9JM99 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Prg4Q9JM99 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
Prg4Q9JM99 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Prg4Q9JM99 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Prg4Q9JM99 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Prg4Q9JM99 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.02□□□□□ -0.49
Prg4Q9JM99 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prg4Q9JM99 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prg4Q9JM99 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prg4Q9JM99 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prg4Q9JM99 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Prg4Q9JM99 Mir686-201ENSMUST00000102174 109 ntBASIC12.02□□□□□ -0.49
Prg4Q9JM99 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Prg4Q9JM99 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.02□□□□□ -0.49
Prg4Q9JM99 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.02□□□□□ -0.49
Prg4Q9JM99 Gm13899-201ENSMUST00000121519 1255 ntBASIC12.02□□□□□ -0.49
Prg4Q9JM99 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Prg4Q9JM99 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.02□□□□□ -0.49
Prg4Q9JM99 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Prg4Q9JM99 Gm23958-201ENSMUST00000157207 105 ntBASIC12.02□□□□□ -0.49
Prg4Q9JM99 Gm26185-201ENSMUST00000157692 266 ntBASIC12.02□□□□□ -0.49
Prg4Q9JM99 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.02□□□□□ -0.49
Prg4Q9JM99 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.02□□□□□ -0.49
Prg4Q9JM99 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.02□□□□□ -0.49
Prg4Q9JM99 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prg4Q9JM99 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.02□□□□□ -0.49
Prg4Q9JM99 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Prg4Q9JM99 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Prg4Q9JM99 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.02□□□□□ -0.49
Prg4Q9JM99 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prg4Q9JM99 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prg4Q9JM99 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prg4Q9JM99 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Prg4Q9JM99 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.02□□□□□ -0.49
Prg4Q9JM99 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Prg4Q9JM99 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prg4Q9JM99 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prg4Q9JM99 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prg4Q9JM99 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prg4Q9JM99 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Prg4Q9JM99 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Prg4Q9JM99 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Prg4Q9JM99 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Prg4Q9JM99 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prg4Q9JM99 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prg4Q9JM99 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.01□□□□□ -0.49
Prg4Q9JM99 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.01□□□□□ -0.49
Prg4Q9JM99 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.01□□□□□ -0.49
Prg4Q9JM99 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prg4Q9JM99 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Prg4Q9JM99 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prg4Q9JM99 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Prg4Q9JM99 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prg4Q9JM99 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prg4Q9JM99 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prg4Q9JM99 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.01□□□□□ -0.49
Prg4Q9JM99 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.01□□□□□ -0.49
Prg4Q9JM99 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Prg4Q9JM99 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prg4Q9JM99 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prg4Q9JM99 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prg4Q9JM99 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prg4Q9JM99 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Prg4Q9JM99 Gm16379-201ENSMUST00000161469 348 ntBASIC12.01□□□□□ -0.49
Prg4Q9JM99 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Prg4Q9JM99 Gm8762-201ENSMUST00000193486 339 ntBASIC12.01□□□□□ -0.49
Prg4Q9JM99 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.01□□□□□ -0.49
Prg4Q9JM99 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.01□□□□□ -0.49
Prg4Q9JM99 Gm18041-201ENSMUST00000218210 618 ntBASIC12.01□□□□□ -0.49
Prg4Q9JM99 Gm19163-201ENSMUST00000223313 780 ntBASIC12.01□□□□□ -0.49
Prg4Q9JM99 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prg4Q9JM99 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prg4Q9JM99 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prg4Q9JM99 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Prg4Q9JM99 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prg4Q9JM99 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prg4Q9JM99 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prg4Q9JM99 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prg4Q9JM99 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prg4Q9JM99 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prg4Q9JM99 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Prg4Q9JM99 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Prg4Q9JM99 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prg4Q9JM99 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.01□□□□□ -0.49
Prg4Q9JM99 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Prg4Q9JM99 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prg4Q9JM99 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prg4Q9JM99 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prg4Q9JM99 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Prg4Q9JM99 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.01□□□□□ -0.49
Prg4Q9JM99 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Prg4Q9JM99 Gm13615-201ENSMUST00000120242 1612 ntBASIC12□□□□□ -0.49
Prg4Q9JM99 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12□□□□□ -0.49
Prg4Q9JM99 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Prg4Q9JM99 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prg4Q9JM99 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Prg4Q9JM99 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prg4Q9JM99 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms