Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Sec61a2Q9JLR1 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Sec61a2Q9JLR1 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a2Q9JLR1 Gm14928-201ENSMUST00000120198 477 ntBASIC11.92□□□□□ -0.5
Sec61a2Q9JLR1 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC11.92□□□□□ -0.5
Sec61a2Q9JLR1 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a2Q9JLR1 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Sec61a2Q9JLR1 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a2Q9JLR1 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a2Q9JLR1 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a2Q9JLR1 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a2Q9JLR1 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Sec61a2Q9JLR1 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Sec61a2Q9JLR1 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a2Q9JLR1 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.92□□□□□ -0.5
Sec61a2Q9JLR1 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a2Q9JLR1 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a2Q9JLR1 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Sec61a2Q9JLR1 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a2Q9JLR1 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Gm12485-201ENSMUST00000119641 291 ntBASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Gm28631-201ENSMUST00000190740 334 ntBASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Gm37917-201ENSMUST00000194711 392 ntBASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Gm5279-201ENSMUST00000199575 745 ntBASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a2Q9JLR1 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Gm23984-201ENSMUST00000157139 203 ntBASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Gm43094-201ENSMUST00000196549 921 ntBASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Gm18041-201ENSMUST00000218210 618 ntBASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms