Protein–RNA interactions for Protein: Q9JHB3

Timp4, Metalloproteinase inhibitor 4, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp4Q9JHB3 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Timp4Q9JHB3 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Timp4Q9JHB3 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.65□□□□□ -0.22
Timp4Q9JHB3 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Timp4Q9JHB3 Gm3890-201ENSMUST00000182416 207 ntBASIC13.65□□□□□ -0.22
Timp4Q9JHB3 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Timp4Q9JHB3 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Timp4Q9JHB3 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Timp4Q9JHB3 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.65□□□□□ -0.22
Timp4Q9JHB3 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.65□□□□□ -0.22
Timp4Q9JHB3 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Timp4Q9JHB3 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Timp4Q9JHB3 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Timp4Q9JHB3 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Timp4Q9JHB3 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Timp4Q9JHB3 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Timp4Q9JHB3 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Timp4Q9JHB3 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.65□□□□□ -0.22
Timp4Q9JHB3 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Timp4Q9JHB3 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Timp4Q9JHB3 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Timp4Q9JHB3 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Timp4Q9JHB3 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Timp4Q9JHB3 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.65□□□□□ -0.22
Timp4Q9JHB3 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Timp4Q9JHB3 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Timp4Q9JHB3 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Timp4Q9JHB3 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Timp4Q9JHB3 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Timp4Q9JHB3 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.64□□□□□ -0.23
Timp4Q9JHB3 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.64□□□□□ -0.23
Timp4Q9JHB3 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Timp4Q9JHB3 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.64□□□□□ -0.23
Timp4Q9JHB3 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.64□□□□□ -0.23
Timp4Q9JHB3 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Timp4Q9JHB3 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Timp4Q9JHB3 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Timp4Q9JHB3 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Timp4Q9JHB3 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Timp4Q9JHB3 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.64□□□□□ -0.23
Timp4Q9JHB3 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Timp4Q9JHB3 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Timp4Q9JHB3 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Timp4Q9JHB3 Gm11793-201ENSMUST00000120433 981 ntBASIC13.64□□□□□ -0.23
Timp4Q9JHB3 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Timp4Q9JHB3 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Timp4Q9JHB3 Gm16379-201ENSMUST00000161469 348 ntBASIC13.64□□□□□ -0.23
Timp4Q9JHB3 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.64□□□□□ -0.23
Timp4Q9JHB3 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Timp4Q9JHB3 Gm27516-201ENSMUST00000184237 98 ntBASIC13.64□□□□□ -0.23
Timp4Q9JHB3 Gm8762-201ENSMUST00000193486 339 ntBASIC13.64□□□□□ -0.23
Timp4Q9JHB3 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.64□□□□□ -0.23
Timp4Q9JHB3 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.64□□□□□ -0.23
Timp4Q9JHB3 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.64□□□□□ -0.23
Timp4Q9JHB3 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.64□□□□□ -0.23
Timp4Q9JHB3 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.64□□□□□ -0.23
Timp4Q9JHB3 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.64□□□□□ -0.23
Timp4Q9JHB3 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Timp4Q9JHB3 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.64□□□□□ -0.23
Timp4Q9JHB3 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Timp4Q9JHB3 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Timp4Q9JHB3 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Timp4Q9JHB3 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Timp4Q9JHB3 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Timp4Q9JHB3 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Timp4Q9JHB3 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.64□□□□□ -0.23
Timp4Q9JHB3 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Timp4Q9JHB3 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.63□□□□□ -0.23
Timp4Q9JHB3 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Timp4Q9JHB3 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Timp4Q9JHB3 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.63□□□□□ -0.23
Timp4Q9JHB3 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.63□□□□□ -0.23
Timp4Q9JHB3 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Timp4Q9JHB3 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Timp4Q9JHB3 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.63□□□□□ -0.23
Timp4Q9JHB3 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Timp4Q9JHB3 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.63□□□□□ -0.23
Timp4Q9JHB3 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.63□□□□□ -0.23
Timp4Q9JHB3 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.63□□□□□ -0.23
Timp4Q9JHB3 Gm22121-201ENSMUST00000175148 54 ntBASIC13.63□□□□□ -0.23
Timp4Q9JHB3 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Timp4Q9JHB3 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Timp4Q9JHB3 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Timp4Q9JHB3 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Timp4Q9JHB3 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Timp4Q9JHB3 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Timp4Q9JHB3 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.63□□□□□ -0.23
Timp4Q9JHB3 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Timp4Q9JHB3 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Timp4Q9JHB3 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Timp4Q9JHB3 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Timp4Q9JHB3 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.63□□□□□ -0.23
Timp4Q9JHB3 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Timp4Q9JHB3 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Timp4Q9JHB3 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.63□□□□□ -0.23
Timp4Q9JHB3 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Timp4Q9JHB3 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Timp4Q9JHB3 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Timp4Q9JHB3 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Timp4Q9JHB3 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms