Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.4□□□□□ -0.43
Trim39Q9ESN2 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trim39Q9ESN2 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trim39Q9ESN2 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trim39Q9ESN2 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim39Q9ESN2 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim39Q9ESN2 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim39Q9ESN2 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim39Q9ESN2 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim39Q9ESN2 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim39Q9ESN2 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim39Q9ESN2 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim39Q9ESN2 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim39Q9ESN2 Mir698-201ENSMUST00000102164 109 ntBASIC12.39□□□□□ -0.43
Trim39Q9ESN2 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim39Q9ESN2 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.39□□□□□ -0.43
Trim39Q9ESN2 Gm13385-201ENSMUST00000121089 220 ntBASIC12.39□□□□□ -0.43
Trim39Q9ESN2 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Trim39Q9ESN2 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim39Q9ESN2 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim39Q9ESN2 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trim39Q9ESN2 Gm8927-201ENSMUST00000181978 981 ntBASIC12.39□□□□□ -0.43
Trim39Q9ESN2 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim39Q9ESN2 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.39□□□□□ -0.43
Trim39Q9ESN2 CT009764.1-201ENSMUST00000222260 483 ntBASIC12.39□□□□□ -0.43
Trim39Q9ESN2 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.39□□□□□ -0.43
Trim39Q9ESN2 Gm3222-201ENSMUST00000071282 990 ntBASIC12.39□□□□□ -0.43
Trim39Q9ESN2 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim39Q9ESN2 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim39Q9ESN2 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim39Q9ESN2 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim39Q9ESN2 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trim39Q9ESN2 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim39Q9ESN2 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim39Q9ESN2 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim39Q9ESN2 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim39Q9ESN2 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim39Q9ESN2 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim39Q9ESN2 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim39Q9ESN2 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim39Q9ESN2 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim39Q9ESN2 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim39Q9ESN2 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trim39Q9ESN2 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim39Q9ESN2 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim39Q9ESN2 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim39Q9ESN2 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trim39Q9ESN2 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim39Q9ESN2 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim39Q9ESN2 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim39Q9ESN2 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.38□□□□□ -0.43
Trim39Q9ESN2 Gm15487-201ENSMUST00000122373 465 ntBASIC12.38□□□□□ -0.43
Trim39Q9ESN2 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim39Q9ESN2 Mir8102-201ENSMUST00000184148 139 ntBASIC12.38□□□□□ -0.43
Trim39Q9ESN2 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.38□□□□□ -0.43
Trim39Q9ESN2 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim39Q9ESN2 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trim39Q9ESN2 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trim39Q9ESN2 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.38□□□□□ -0.43
Trim39Q9ESN2 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim39Q9ESN2 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim39Q9ESN2 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Trim39Q9ESN2 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim39Q9ESN2 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trim39Q9ESN2 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim39Q9ESN2 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim39Q9ESN2 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim39Q9ESN2 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.38□□□□□ -0.43
Trim39Q9ESN2 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Mir7684-201ENSMUST00000183858 60 ntBASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Mir7023-201ENSMUST00000185093 64 ntBASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms