Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rsph3bQ9DA80 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.49□□□□□ -0.09
Rsph3bQ9DA80 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.49□□□□□ -0.09
Rsph3bQ9DA80 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rsph3bQ9DA80 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Rsph3bQ9DA80 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rsph3bQ9DA80 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rsph3bQ9DA80 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rsph3bQ9DA80 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rsph3bQ9DA80 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.49□□□□□ -0.09
Rsph3bQ9DA80 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rsph3bQ9DA80 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rsph3bQ9DA80 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Rsph3bQ9DA80 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rsph3bQ9DA80 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rsph3bQ9DA80 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Rsph3bQ9DA80 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.49□□□□□ -0.09
Rsph3bQ9DA80 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.49□□□□□ -0.09
Rsph3bQ9DA80 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rsph3bQ9DA80 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 Gm15198-201ENSMUST00000117283 177 ntBASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 Gm26927-201ENSMUST00000182385 965 ntBASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 Gm9823-201ENSMUST00000051212 327 ntBASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rsph3bQ9DA80 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rsph3bQ9DA80 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.47□□□□□ -0.09
Rsph3bQ9DA80 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.47□□□□□ -0.09
Rsph3bQ9DA80 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rsph3bQ9DA80 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rsph3bQ9DA80 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rsph3bQ9DA80 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rsph3bQ9DA80 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rsph3bQ9DA80 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rsph3bQ9DA80 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rsph3bQ9DA80 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.47□□□□□ -0.09
Rsph3bQ9DA80 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rsph3bQ9DA80 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.47□□□□□ -0.09
Rsph3bQ9DA80 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rsph3bQ9DA80 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.47□□□□□ -0.09
Rsph3bQ9DA80 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rsph3bQ9DA80 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.47□□□□□ -0.09
Rsph3bQ9DA80 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rsph3bQ9DA80 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rsph3bQ9DA80 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Rsph3bQ9DA80 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rsph3bQ9DA80 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Rsph3bQ9DA80 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.47□□□□□ -0.09
Rsph3bQ9DA80 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rsph3bQ9DA80 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rsph3bQ9DA80 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rsph3bQ9DA80 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rsph3bQ9DA80 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rsph3bQ9DA80 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rsph3bQ9DA80 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rsph3bQ9DA80 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rsph3bQ9DA80 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rsph3bQ9DA80 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rsph3bQ9DA80 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.46□□□□□ -0.09
Rsph3bQ9DA80 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rsph3bQ9DA80 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rsph3bQ9DA80 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rsph3bQ9DA80 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Rsph3bQ9DA80 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms