Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Gm29608-201ENSMUST00000190444 463 ntBASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Gm42550-201ENSMUST00000201553 960 ntBASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Gm43860-201ENSMUST00000201742 2705 ntBASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Pck2-205ENSMUST00000226352 2784 ntBASIC14.22□□□□□ -0.13
Gtf3c6Q9D8P7 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gtf3c6Q9D8P7 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gtf3c6Q9D8P7 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Gtf3c6Q9D8P7 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gtf3c6Q9D8P7 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gtf3c6Q9D8P7 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Gtf3c6Q9D8P7 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gtf3c6Q9D8P7 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gtf3c6Q9D8P7 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gtf3c6Q9D8P7 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gtf3c6Q9D8P7 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gtf3c6Q9D8P7 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.22□□□□□ -0.13
Gtf3c6Q9D8P7 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gtf3c6Q9D8P7 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.22□□□□□ -0.13
Gtf3c6Q9D8P7 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gtf3c6Q9D8P7 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.22□□□□□ -0.13
Gtf3c6Q9D8P7 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.22□□□□□ -0.13
Gtf3c6Q9D8P7 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Gtf3c6Q9D8P7 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.22□□□□□ -0.13
Gtf3c6Q9D8P7 Gm44855-201ENSMUST00000205725 362 ntBASIC14.22□□□□□ -0.13
Gtf3c6Q9D8P7 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gtf3c6Q9D8P7 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gtf3c6Q9D8P7 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gtf3c6Q9D8P7 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gtf3c6Q9D8P7 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Gtf3c6Q9D8P7 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gtf3c6Q9D8P7 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gtf3c6Q9D8P7 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gtf3c6Q9D8P7 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gtf3c6Q9D8P7 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gtf3c6Q9D8P7 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gtf3c6Q9D8P7 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gtf3c6Q9D8P7 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gtf3c6Q9D8P7 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Gtf3c6Q9D8P7 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Gtf3c6Q9D8P7 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gtf3c6Q9D8P7 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gtf3c6Q9D8P7 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gtf3c6Q9D8P7 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gtf3c6Q9D8P7 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gtf3c6Q9D8P7 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gtf3c6Q9D8P7 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Gtf3c6Q9D8P7 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.21□□□□□ -0.13
Gtf3c6Q9D8P7 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gtf3c6Q9D8P7 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gtf3c6Q9D8P7 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.21□□□□□ -0.13
Gtf3c6Q9D8P7 Auts2-212ENSMUST00000178555 309 ntBASIC14.21□□□□□ -0.13
Gtf3c6Q9D8P7 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.21□□□□□ -0.13
Gtf3c6Q9D8P7 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gtf3c6Q9D8P7 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Gtf3c6Q9D8P7 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gtf3c6Q9D8P7 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gtf3c6Q9D8P7 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Gtf3c6Q9D8P7 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Gtf3c6Q9D8P7 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.21□□□□□ -0.14
Gtf3c6Q9D8P7 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gtf3c6Q9D8P7 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gtf3c6Q9D8P7 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.21□□□□□ -0.14
Gtf3c6Q9D8P7 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.21□□□□□ -0.14
Gtf3c6Q9D8P7 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Gtf3c6Q9D8P7 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gtf3c6Q9D8P7 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
Gtf3c6Q9D8P7 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gtf3c6Q9D8P7 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gtf3c6Q9D8P7 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf3c6Q9D8P7 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.2□□□□□ -0.14
Gtf3c6Q9D8P7 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf3c6Q9D8P7 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf3c6Q9D8P7 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf3c6Q9D8P7 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf3c6Q9D8P7 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms