Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Gm18584-201ENSMUST00000203098 964 ntBASIC15.69■□□□□ 0.1
Stag1Q9D3E6 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC15.69■□□□□ 0.1
Stag1Q9D3E6 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Stag1Q9D3E6 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Stag1Q9D3E6 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Stag1Q9D3E6 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC15.69■□□□□ 0.1
Stag1Q9D3E6 Gm15897-201ENSMUST00000117770 1486 ntBASIC15.69■□□□□ 0.1
Stag1Q9D3E6 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.69■□□□□ 0.1
Stag1Q9D3E6 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Stag1Q9D3E6 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Stag1Q9D3E6 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.69■□□□□ 0.1
Stag1Q9D3E6 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Stag1Q9D3E6 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Stag1Q9D3E6 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Stag1Q9D3E6 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Stag1Q9D3E6 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Stag1Q9D3E6 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Stag1Q9D3E6 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Stag1Q9D3E6 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Stag1Q9D3E6 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Stag1Q9D3E6 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Stag1Q9D3E6 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Stag1Q9D3E6 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Stag1Q9D3E6 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Stag1Q9D3E6 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Stag1Q9D3E6 AC121805.2-201ENSMUST00000218808 2538 ntBASIC15.68■□□□□ 0.1
Stag1Q9D3E6 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Stag1Q9D3E6 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Stag1Q9D3E6 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Stag1Q9D3E6 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Stag1Q9D3E6 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Stag1Q9D3E6 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Stag1Q9D3E6 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC15.68■□□□□ 0.1
Stag1Q9D3E6 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC15.68■□□□□ 0.1
Stag1Q9D3E6 Gm3756-201ENSMUST00000169182 1355 ntBASIC15.68■□□□□ 0.1
Stag1Q9D3E6 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Stag1Q9D3E6 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Stag1Q9D3E6 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Stag1Q9D3E6 Gm17208-201ENSMUST00000168388 535 ntBASIC15.68■□□□□ 0.1
Stag1Q9D3E6 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Stag1Q9D3E6 Mospd4-201ENSMUST00000180618 576 ntBASIC15.68■□□□□ 0.1
Stag1Q9D3E6 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC15.68■□□□□ 0.1
Stag1Q9D3E6 Gm7046-201ENSMUST00000221351 977 ntBASIC15.68■□□□□ 0.1
Stag1Q9D3E6 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Stag1Q9D3E6 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Stag1Q9D3E6 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Stag1Q9D3E6 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Stag1Q9D3E6 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC15.68■□□□□ 0.1
Stag1Q9D3E6 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Stag1Q9D3E6 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Stag1Q9D3E6 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Stag1Q9D3E6 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Stag1Q9D3E6 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Stag1Q9D3E6 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Stag1Q9D3E6 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Stag1Q9D3E6 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Stag1Q9D3E6 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Stag1Q9D3E6 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Stag1Q9D3E6 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Stag1Q9D3E6 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Stag1Q9D3E6 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Stag1Q9D3E6 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Stag1Q9D3E6 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Stag1Q9D3E6 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Stag1Q9D3E6 Gm45779-201ENSMUST00000212189 4064 ntBASIC15.67■□□□□ 0.1
Stag1Q9D3E6 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Stag1Q9D3E6 AC101945.2-201ENSMUST00000227886 1377 ntBASIC15.67■□□□□ 0.1
Stag1Q9D3E6 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Stag1Q9D3E6 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Stag1Q9D3E6 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Stag1Q9D3E6 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Stag1Q9D3E6 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Stag1Q9D3E6 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Stag1Q9D3E6 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Stag1Q9D3E6 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Stag1Q9D3E6 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Stag1Q9D3E6 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Stag1Q9D3E6 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Stag1Q9D3E6 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Stag1Q9D3E6 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Stag1Q9D3E6 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC15.67■□□□□ 0.1
Stag1Q9D3E6 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC15.67■□□□□ 0.1
Stag1Q9D3E6 Gm2991-201ENSMUST00000173338 480 ntBASIC15.67■□□□□ 0.1
Stag1Q9D3E6 Gm37489-201ENSMUST00000191883 159 ntBASIC15.67■□□□□ 0.1
Stag1Q9D3E6 Gm6621-201ENSMUST00000193251 772 ntBASIC15.67■□□□□ 0.1
Stag1Q9D3E6 AC132384.14-201ENSMUST00000219346 1147 ntBASIC15.67■□□□□ 0.1
Stag1Q9D3E6 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC15.67■□□□□ 0.1
Stag1Q9D3E6 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Stag1Q9D3E6 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Stag1Q9D3E6 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Stag1Q9D3E6 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Stag1Q9D3E6 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Stag1Q9D3E6 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Stag1Q9D3E6 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Stag1Q9D3E6 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Stag1Q9D3E6 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Stag1Q9D3E6 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Stag1Q9D3E6 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Stag1Q9D3E6 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Stag1Q9D3E6 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms