Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Gm8410-201ENSMUST00000117225 605 ntBASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Gm24158-201ENSMUST00000175263 71 ntBASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Gm43474-201ENSMUST00000196415 774 ntBASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1bQ9D0N7 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1bQ9D0N7 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1bQ9D0N7 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1bQ9D0N7 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1bQ9D0N7 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1bQ9D0N7 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Chaf1bQ9D0N7 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.38□□□□□ -0.43
Chaf1bQ9D0N7 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.38□□□□□ -0.43
Chaf1bQ9D0N7 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1bQ9D0N7 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1bQ9D0N7 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1bQ9D0N7 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1bQ9D0N7 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Chaf1bQ9D0N7 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.38□□□□□ -0.43
Chaf1bQ9D0N7 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1bQ9D0N7 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.38□□□□□ -0.43
Chaf1bQ9D0N7 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.38□□□□□ -0.43
Chaf1bQ9D0N7 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Chaf1bQ9D0N7 Gm5779-201ENSMUST00000218467 910 ntBASIC12.38□□□□□ -0.43
Chaf1bQ9D0N7 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.38□□□□□ -0.43
Chaf1bQ9D0N7 Shd-206ENSMUST00000225145 998 ntBASIC12.38□□□□□ -0.43
Chaf1bQ9D0N7 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.38□□□□□ -0.43
Chaf1bQ9D0N7 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1bQ9D0N7 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1bQ9D0N7 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Chaf1bQ9D0N7 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1bQ9D0N7 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.38□□□□□ -0.43
Chaf1bQ9D0N7 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1bQ9D0N7 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1bQ9D0N7 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1bQ9D0N7 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1bQ9D0N7 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1bQ9D0N7 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1bQ9D0N7 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1bQ9D0N7 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1bQ9D0N7 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1bQ9D0N7 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1bQ9D0N7 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chaf1bQ9D0N7 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Chaf1bQ9D0N7 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Chaf1bQ9D0N7 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Chaf1bQ9D0N7 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chaf1bQ9D0N7 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chaf1bQ9D0N7 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.37□□□□□ -0.43
Chaf1bQ9D0N7 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chaf1bQ9D0N7 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.37□□□□□ -0.43
Chaf1bQ9D0N7 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chaf1bQ9D0N7 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chaf1bQ9D0N7 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chaf1bQ9D0N7 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chaf1bQ9D0N7 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chaf1bQ9D0N7 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chaf1bQ9D0N7 Matn2-203ENSMUST00000226766 3252 ntBASIC12.37□□□□□ -0.43
Chaf1bQ9D0N7 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Chaf1bQ9D0N7 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chaf1bQ9D0N7 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chaf1bQ9D0N7 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chaf1bQ9D0N7 Gm6912-201ENSMUST00000117218 544 ntBASIC12.37□□□□□ -0.43
Chaf1bQ9D0N7 Gm4995-201ENSMUST00000117247 432 ntBASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms