Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ssu72Q9CY97 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ssu72Q9CY97 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ssu72Q9CY97 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ssu72Q9CY97 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ssu72Q9CY97 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ssu72Q9CY97 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssu72Q9CY97 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssu72Q9CY97 Mir449b-201ENSMUST00000104833 80 ntBASIC13.09□□□□□ -0.31
Ssu72Q9CY97 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.09□□□□□ -0.31
Ssu72Q9CY97 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ssu72Q9CY97 Gm4995-201ENSMUST00000117247 432 ntBASIC13.09□□□□□ -0.31
Ssu72Q9CY97 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.09□□□□□ -0.31
Ssu72Q9CY97 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ssu72Q9CY97 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ssu72Q9CY97 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.09□□□□□ -0.31
Ssu72Q9CY97 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.09□□□□□ -0.31
Ssu72Q9CY97 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssu72Q9CY97 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ssu72Q9CY97 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Ssu72Q9CY97 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssu72Q9CY97 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssu72Q9CY97 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssu72Q9CY97 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssu72Q9CY97 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssu72Q9CY97 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssu72Q9CY97 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssu72Q9CY97 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssu72Q9CY97 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.09□□□□□ -0.31
Ssu72Q9CY97 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ssu72Q9CY97 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssu72Q9CY97 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssu72Q9CY97 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.09□□□□□ -0.31
Ssu72Q9CY97 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ssu72Q9CY97 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ssu72Q9CY97 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.09□□□□□ -0.31
Ssu72Q9CY97 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.09□□□□□ -0.31
Ssu72Q9CY97 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.08□□□□□ -0.31
Ssu72Q9CY97 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ssu72Q9CY97 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssu72Q9CY97 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Ssu72Q9CY97 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssu72Q9CY97 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssu72Q9CY97 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.08□□□□□ -0.32
Ssu72Q9CY97 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssu72Q9CY97 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.08□□□□□ -0.32
Ssu72Q9CY97 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssu72Q9CY97 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Ssu72Q9CY97 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssu72Q9CY97 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ssu72Q9CY97 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssu72Q9CY97 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssu72Q9CY97 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Ssu72Q9CY97 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.08□□□□□ -0.32
Ssu72Q9CY97 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.08□□□□□ -0.32
Ssu72Q9CY97 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssu72Q9CY97 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.08□□□□□ -0.32
Ssu72Q9CY97 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssu72Q9CY97 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssu72Q9CY97 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssu72Q9CY97 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssu72Q9CY97 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Ssu72Q9CY97 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ssu72Q9CY97 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ssu72Q9CY97 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssu72Q9CY97 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssu72Q9CY97 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.08□□□□□ -0.32
Ssu72Q9CY97 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ssu72Q9CY97 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssu72Q9CY97 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ssu72Q9CY97 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssu72Q9CY97 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ssu72Q9CY97 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssu72Q9CY97 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Ssu72Q9CY97 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssu72Q9CY97 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssu72Q9CY97 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssu72Q9CY97 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ssu72Q9CY97 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ssu72Q9CY97 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssu72Q9CY97 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ssu72Q9CY97 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Ssu72Q9CY97 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssu72Q9CY97 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssu72Q9CY97 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.07□□□□□ -0.32
Ssu72Q9CY97 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Ssu72Q9CY97 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.07□□□□□ -0.32
Ssu72Q9CY97 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms