Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ska1Q9CPV1 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ska1Q9CPV1 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ska1Q9CPV1 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ska1Q9CPV1 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ska1Q9CPV1 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ska1Q9CPV1 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ska1Q9CPV1 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ska1Q9CPV1 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ska1Q9CPV1 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ska1Q9CPV1 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ska1Q9CPV1 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ska1Q9CPV1 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Ska1Q9CPV1 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ska1Q9CPV1 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ska1Q9CPV1 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.49□□□□□ -0.41
Ska1Q9CPV1 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ska1Q9CPV1 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ska1Q9CPV1 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ska1Q9CPV1 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.49□□□□□ -0.41
Ska1Q9CPV1 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ska1Q9CPV1 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ska1Q9CPV1 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ska1Q9CPV1 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ska1Q9CPV1 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ska1Q9CPV1 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ska1Q9CPV1 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.49□□□□□ -0.41
Ska1Q9CPV1 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.49□□□□□ -0.41
Ska1Q9CPV1 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.49□□□□□ -0.41
Ska1Q9CPV1 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.49□□□□□ -0.41
Ska1Q9CPV1 Gm13385-201ENSMUST00000121089 220 ntBASIC12.49□□□□□ -0.41
Ska1Q9CPV1 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ska1Q9CPV1 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ska1Q9CPV1 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Ska1Q9CPV1 Gm24420-201ENSMUST00000176676 59 ntBASIC12.49□□□□□ -0.41
Ska1Q9CPV1 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ska1Q9CPV1 Gm8927-201ENSMUST00000181978 981 ntBASIC12.49□□□□□ -0.41
Ska1Q9CPV1 Gm17837-201ENSMUST00000186435 985 ntBASIC12.49□□□□□ -0.41
Ska1Q9CPV1 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ska1Q9CPV1 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ska1Q9CPV1 Gm3222-201ENSMUST00000071282 990 ntBASIC12.49□□□□□ -0.41
Ska1Q9CPV1 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ska1Q9CPV1 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.49□□□□□ -0.41
Ska1Q9CPV1 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ska1Q9CPV1 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ska1Q9CPV1 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ska1Q9CPV1 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ska1Q9CPV1 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ska1Q9CPV1 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ska1Q9CPV1 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ska1Q9CPV1 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.49□□□□□ -0.41
Ska1Q9CPV1 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Gm13616-201ENSMUST00000120600 222 ntBASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Gm27618-201ENSMUST00000183671 60 ntBASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Gm27321-201ENSMUST00000185021 205 ntBASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ska1Q9CPV1 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms