Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Gm23935-201ENSMUST00000102303 57 ntBASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Gm24270-201ENSMUST00000102326 57 ntBASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Gm15653-201ENSMUST00000119247 907 ntBASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Gm12428-201ENSMUST00000119844 727 ntBASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Gm15393-201ENSMUST00000120499 219 ntBASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Mir1895-201ENSMUST00000122615 79 ntBASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Gm24245-201ENSMUST00000157318 57 ntBASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Gm29541-201ENSMUST00000191351 678 ntBASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Krt88Q9CPR6 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Ndufaf2-202ENSMUST00000223734 556 ntBASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Krt88Q9CPR6 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Krt88Q9CPR6 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.9□□□□□ -0.51
Krt88Q9CPR6 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Krt88Q9CPR6 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Krt88Q9CPR6 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Krt88Q9CPR6 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Krt88Q9CPR6 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Krt88Q9CPR6 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Krt88Q9CPR6 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.89□□□□□ -0.51
Krt88Q9CPR6 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Krt88Q9CPR6 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.89□□□□□ -0.51
Krt88Q9CPR6 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Krt88Q9CPR6 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Krt88Q9CPR6 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Krt88Q9CPR6 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Krt88Q9CPR6 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Krt88Q9CPR6 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Krt88Q9CPR6 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC11.89□□□□□ -0.51
Krt88Q9CPR6 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC11.89□□□□□ -0.51
Krt88Q9CPR6 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.89□□□□□ -0.51
Krt88Q9CPR6 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Krt88Q9CPR6 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.89□□□□□ -0.51
Krt88Q9CPR6 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Krt88Q9CPR6 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC11.89□□□□□ -0.51
Krt88Q9CPR6 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Krt88Q9CPR6 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Krt88Q9CPR6 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Krt88Q9CPR6 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Krt88Q9CPR6 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Krt88Q9CPR6 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Krt88Q9CPR6 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Krt88Q9CPR6 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Krt88Q9CPR6 Gm13332-201ENSMUST00000120451 1398 ntBASIC11.89□□□□□ -0.51
Krt88Q9CPR6 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Krt88Q9CPR6 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Krt88Q9CPR6 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Krt88Q9CPR6 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.89□□□□□ -0.51
Krt88Q9CPR6 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Krt88Q9CPR6 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.89□□□□□ -0.51
Krt88Q9CPR6 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Krt88Q9CPR6 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Krt88Q9CPR6 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Krt88Q9CPR6 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Krt88Q9CPR6 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Krt88Q9CPR6 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Krt88Q9CPR6 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Krt88Q9CPR6 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.88□□□□□ -0.51
Krt88Q9CPR6 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Krt88Q9CPR6 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.88□□□□□ -0.51
Krt88Q9CPR6 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Krt88Q9CPR6 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Krt88Q9CPR6 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Krt88Q9CPR6 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms