Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.96□□□□□ -0.33
Trim8Q99PJ2 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.96□□□□□ -0.33
Trim8Q99PJ2 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim8Q99PJ2 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim8Q99PJ2 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim8Q99PJ2 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Trim8Q99PJ2 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim8Q99PJ2 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim8Q99PJ2 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim8Q99PJ2 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trim8Q99PJ2 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim8Q99PJ2 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim8Q99PJ2 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim8Q99PJ2 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trim8Q99PJ2 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim8Q99PJ2 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Gm24420-201ENSMUST00000176676 59 ntBASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim8Q99PJ2 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim8Q99PJ2 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim8Q99PJ2 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim8Q99PJ2 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trim8Q99PJ2 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim8Q99PJ2 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim8Q99PJ2 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trim8Q99PJ2 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim8Q99PJ2 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim8Q99PJ2 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim8Q99PJ2 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim8Q99PJ2 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim8Q99PJ2 Gm15240-201ENSMUST00000118156 720 ntBASIC12.94□□□□□ -0.34
Trim8Q99PJ2 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim8Q99PJ2 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trim8Q99PJ2 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim8Q99PJ2 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trim8Q99PJ2 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trim8Q99PJ2 Gm44344-201ENSMUST00000200287 129 ntBASIC12.94□□□□□ -0.34
Trim8Q99PJ2 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.94□□□□□ -0.34
Trim8Q99PJ2 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.94□□□□□ -0.34
Trim8Q99PJ2 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trim8Q99PJ2 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim8Q99PJ2 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trim8Q99PJ2 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim8Q99PJ2 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Trim8Q99PJ2 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim8Q99PJ2 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim8Q99PJ2 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim8Q99PJ2 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim8Q99PJ2 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trim8Q99PJ2 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim8Q99PJ2 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim8Q99PJ2 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim8Q99PJ2 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim8Q99PJ2 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim8Q99PJ2 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim8Q99PJ2 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trim8Q99PJ2 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms