Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 Gm8805-201ENSMUST00000117848 313 ntBASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 Gm11637-201ENSMUST00000120601 592 ntBASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 Gm38266-201ENSMUST00000194931 421 ntBASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b1Q99NB9 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Gm14723-201ENSMUST00000118686 215 ntBASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Gm11793-201ENSMUST00000120433 981 ntBASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Gm16479-201ENSMUST00000121706 932 ntBASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Gm27501-201ENSMUST00000183599 107 ntBASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Gm3961-201ENSMUST00000204425 994 ntBASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b1Q99NB9 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b1Q99NB9 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.97□□□□□ -0.17
Sf3b1Q99NB9 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Sf3b1Q99NB9 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b1Q99NB9 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b1Q99NB9 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b1Q99NB9 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b1Q99NB9 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b1Q99NB9 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.97□□□□□ -0.17
Sf3b1Q99NB9 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Sf3b1Q99NB9 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b1Q99NB9 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b1Q99NB9 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms