Protein–RNA interactions for Protein: Q99ME3

Sncaip, Synphilin-1, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaipQ99ME3 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SncaipQ99ME3 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SncaipQ99ME3 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SncaipQ99ME3 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SncaipQ99ME3 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SncaipQ99ME3 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SncaipQ99ME3 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SncaipQ99ME3 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SncaipQ99ME3 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.66□□□□□ -0.22
SncaipQ99ME3 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SncaipQ99ME3 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SncaipQ99ME3 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SncaipQ99ME3 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SncaipQ99ME3 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SncaipQ99ME3 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SncaipQ99ME3 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SncaipQ99ME3 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SncaipQ99ME3 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SncaipQ99ME3 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.65□□□□□ -0.22
SncaipQ99ME3 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SncaipQ99ME3 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SncaipQ99ME3 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SncaipQ99ME3 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
SncaipQ99ME3 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SncaipQ99ME3 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SncaipQ99ME3 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
SncaipQ99ME3 Gm12490-201ENSMUST00000120255 560 ntBASIC13.65□□□□□ -0.22
SncaipQ99ME3 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
SncaipQ99ME3 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SncaipQ99ME3 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.65□□□□□ -0.22
SncaipQ99ME3 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SncaipQ99ME3 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.65□□□□□ -0.22
SncaipQ99ME3 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.65□□□□□ -0.22
SncaipQ99ME3 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SncaipQ99ME3 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SncaipQ99ME3 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SncaipQ99ME3 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SncaipQ99ME3 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SncaipQ99ME3 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.65□□□□□ -0.22
SncaipQ99ME3 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SncaipQ99ME3 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SncaipQ99ME3 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SncaipQ99ME3 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SncaipQ99ME3 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SncaipQ99ME3 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SncaipQ99ME3 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SncaipQ99ME3 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SncaipQ99ME3 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SncaipQ99ME3 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.65□□□□□ -0.22
SncaipQ99ME3 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
SncaipQ99ME3 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
SncaipQ99ME3 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SncaipQ99ME3 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
SncaipQ99ME3 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SncaipQ99ME3 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SncaipQ99ME3 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SncaipQ99ME3 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SncaipQ99ME3 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SncaipQ99ME3 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SncaipQ99ME3 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
SncaipQ99ME3 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
SncaipQ99ME3 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.64□□□□□ -0.23
SncaipQ99ME3 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SncaipQ99ME3 Gm12928-201ENSMUST00000117115 573 ntBASIC13.64□□□□□ -0.23
SncaipQ99ME3 Gm11918-201ENSMUST00000121660 179 ntBASIC13.64□□□□□ -0.23
SncaipQ99ME3 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.64□□□□□ -0.23
SncaipQ99ME3 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.64□□□□□ -0.23
SncaipQ99ME3 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SncaipQ99ME3 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.64□□□□□ -0.23
SncaipQ99ME3 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.64□□□□□ -0.23
SncaipQ99ME3 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
SncaipQ99ME3 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.64□□□□□ -0.23
SncaipQ99ME3 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.64□□□□□ -0.23
SncaipQ99ME3 Gm8463-201ENSMUST00000208573 613 ntBASIC13.64□□□□□ -0.23
SncaipQ99ME3 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SncaipQ99ME3 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SncaipQ99ME3 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.64□□□□□ -0.23
SncaipQ99ME3 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.64□□□□□ -0.23
SncaipQ99ME3 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.64□□□□□ -0.23
SncaipQ99ME3 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.64□□□□□ -0.23
SncaipQ99ME3 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SncaipQ99ME3 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SncaipQ99ME3 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SncaipQ99ME3 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SncaipQ99ME3 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SncaipQ99ME3 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SncaipQ99ME3 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SncaipQ99ME3 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SncaipQ99ME3 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
SncaipQ99ME3 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SncaipQ99ME3 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SncaipQ99ME3 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SncaipQ99ME3 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SncaipQ99ME3 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
SncaipQ99ME3 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SncaipQ99ME3 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SncaipQ99ME3 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SncaipQ99ME3 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
SncaipQ99ME3 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SncaipQ99ME3 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms