Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp1b1Q99LU0 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp1b1Q99LU0 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.51□□□□□ -0.41
Chmp1b1Q99LU0 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp1b1Q99LU0 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp1b1Q99LU0 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Chmp1b1Q99LU0 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp1b1Q99LU0 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Chmp1b1Q99LU0 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Chmp1b1Q99LU0 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Chmp1b1Q99LU0 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.51□□□□□ -0.41
Chmp1b1Q99LU0 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp1b1Q99LU0 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp1b1Q99LU0 Gm5279-201ENSMUST00000199575 745 ntBASIC12.51□□□□□ -0.41
Chmp1b1Q99LU0 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp1b1Q99LU0 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Chmp1b1Q99LU0 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp1b1Q99LU0 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp1b1Q99LU0 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp1b1Q99LU0 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp1b1Q99LU0 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp1b1Q99LU0 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.51□□□□□ -0.41
Chmp1b1Q99LU0 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.51□□□□□ -0.41
Chmp1b1Q99LU0 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp1b1Q99LU0 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp1b1Q99LU0 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp1b1Q99LU0 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp1b1Q99LU0 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.51□□□□□ -0.41
Chmp1b1Q99LU0 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp1b1Q99LU0 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp1b1Q99LU0 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp1b1Q99LU0 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp1b1Q99LU0 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Gm42612-201ENSMUST00000197986 623 ntBASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Gm43170-201ENSMUST00000199827 612 ntBASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp1b1Q99LU0 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp1b1Q99LU0 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp1b1Q99LU0 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp1b1Q99LU0 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp1b1Q99LU0 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp1b1Q99LU0 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp1b1Q99LU0 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp1b1Q99LU0 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp1b1Q99LU0 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp1b1Q99LU0 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Chmp1b1Q99LU0 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Chmp1b1Q99LU0 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp1b1Q99LU0 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp1b1Q99LU0 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp1b1Q99LU0 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp1b1Q99LU0 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp1b1Q99LU0 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.49□□□□□ -0.41
Chmp1b1Q99LU0 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.49□□□□□ -0.41
Chmp1b1Q99LU0 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms