Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdha8Q91Y12 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha8Q91Y12 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha8Q91Y12 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha8Q91Y12 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha8Q91Y12 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha8Q91Y12 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha8Q91Y12 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha8Q91Y12 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha8Q91Y12 Gm15371-201ENSMUST00000117057 784 ntBASIC12.87□□□□□ -0.35
Pcdha8Q91Y12 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Pcdha8Q91Y12 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha8Q91Y12 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha8Q91Y12 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha8Q91Y12 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha8Q91Y12 Gm42550-201ENSMUST00000201553 960 ntBASIC12.87□□□□□ -0.35
Pcdha8Q91Y12 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.87□□□□□ -0.35
Pcdha8Q91Y12 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.87□□□□□ -0.35
Pcdha8Q91Y12 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.87□□□□□ -0.35
Pcdha8Q91Y12 Gm18624-201ENSMUST00000220966 658 ntBASIC12.87□□□□□ -0.35
Pcdha8Q91Y12 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha8Q91Y12 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha8Q91Y12 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Pcdha8Q91Y12 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha8Q91Y12 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
Pcdha8Q91Y12 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Pcdha8Q91Y12 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha8Q91Y12 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha8Q91Y12 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.87□□□□□ -0.35
Pcdha8Q91Y12 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha8Q91Y12 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.87□□□□□ -0.35
Pcdha8Q91Y12 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Pcdha8Q91Y12 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha8Q91Y12 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Pcdha8Q91Y12 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha8Q91Y12 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha8Q91Y12 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 Mir874-201ENSMUST00000104769 76 ntBASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 Gm29608-201ENSMUST00000190444 463 ntBASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 Gm15823-201ENSMUST00000064305 670 ntBASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha8Q91Y12 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdha8Q91Y12 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdha8Q91Y12 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdha8Q91Y12 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdha8Q91Y12 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdha8Q91Y12 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.85□□□□□ -0.35
Pcdha8Q91Y12 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdha8Q91Y12 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdha8Q91Y12 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdha8Q91Y12 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Pcdha8Q91Y12 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdha8Q91Y12 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Pcdha8Q91Y12 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdha8Q91Y12 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdha8Q91Y12 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdha8Q91Y12 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdha8Q91Y12 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdha8Q91Y12 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdha8Q91Y12 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdha8Q91Y12 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdha8Q91Y12 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdha8Q91Y12 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms