Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb6Q91XZ4 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb6Q91XZ4 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.56□□□□□ -0.24
Pcdhb6Q91XZ4 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb6Q91XZ4 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb6Q91XZ4 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb6Q91XZ4 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Pcdhb6Q91XZ4 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Pcdhb6Q91XZ4 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb6Q91XZ4 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb6Q91XZ4 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Pcdhb6Q91XZ4 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Gm7287-201ENSMUST00000205267 602 ntBASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb6Q91XZ4 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb6Q91XZ4 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb6Q91XZ4 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb6Q91XZ4 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Pcdhb6Q91XZ4 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb6Q91XZ4 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb6Q91XZ4 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb6Q91XZ4 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb6Q91XZ4 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb6Q91XZ4 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb6Q91XZ4 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.54□□□□□ -0.24
Pcdhb6Q91XZ4 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb6Q91XZ4 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb6Q91XZ4 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdhb6Q91XZ4 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.54□□□□□ -0.24
Pcdhb6Q91XZ4 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.54□□□□□ -0.24
Pcdhb6Q91XZ4 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdhb6Q91XZ4 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.54□□□□□ -0.24
Pcdhb6Q91XZ4 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pcdhb6Q91XZ4 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdhb6Q91XZ4 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.54□□□□□ -0.24
Pcdhb6Q91XZ4 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb6Q91XZ4 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb6Q91XZ4 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Pcdhb6Q91XZ4 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pcdhb6Q91XZ4 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.54□□□□□ -0.24
Pcdhb6Q91XZ4 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb6Q91XZ4 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb6Q91XZ4 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Pcdhb6Q91XZ4 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb6Q91XZ4 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb6Q91XZ4 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.54□□□□□ -0.24
Pcdhb6Q91XZ4 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb6Q91XZ4 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb6Q91XZ4 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb6Q91XZ4 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb6Q91XZ4 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb6Q91XZ4 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb6Q91XZ4 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb6Q91XZ4 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Pcdhb6Q91XZ4 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb6Q91XZ4 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms